Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5174
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 36 0.022
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 34 0.12
Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical p... 30 1.5
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 30 1.5
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 29 2.5
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 25 3.0
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 4.4
AC006635-1|AAY86194.1| 201|Caenorhabditis elegans Hypothetical ... 28 5.9
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 28 7.8
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 28 7.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 7.8
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 454 REFQFSCQPGTIFNVKLNVCDWPENTDRPECS 549
R+ +C GT+FN L+VCDWP P CS
Sbjct: 1268 RKVVMTCPSGTVFNPLLSVCDWPSAV--PSCS 1297
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 460 FQFSCQPGTIFNVKLNVCDWPENTDRP 540
FQ C PGT+FN+ CD+ TD P
Sbjct: 218 FQRYCPPGTVFNINQQSCDFQCTTDDP 244
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +3
Query: 18 GAMTWAIDMDDFKGLCGEEN----PLIKLLHKHMSTYTVPPARTGHATPTPEWARPPSTP 185
GA W +D DDF C N PLI ++ K + +P + G T P T
Sbjct: 390 GAFVWTLDFDDFNAGCSNSNGQLYPLISVIAKELGGVIIP--KKGGVTTAPTTVATTVTT 447
Query: 186 SDP 194
P
Sbjct: 448 GRP 450
>Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical
protein Y48E1B.7 protein.
Length = 751
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 140 TRNSYSGMGASTFNSIRPI*G*SDSYHNHHHRETDDNKNHREANYYHNE 286
TR + S GA+ + I + + YH+HHH + + E Y+ +
Sbjct: 638 TRQAASAPGAAAGDEIDVVGIDEEDYHHHHHMDLHEVVEEEEVGYHQED 686
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 472 CQPGTIFNVKLNVCDWPENT 531
C PGT+F+V+ VC W N+
Sbjct: 310 CAPGTVFDVQSQVCVWDTNS 329
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 454 REFQFSCQPGTIFNVKLNVCDWPENT 531
RE F C P +FN +CD+PE +
Sbjct: 333 RENIFECPPSLVFNENSLICDYPETS 358
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 469 SCQPGTIFNVKLNVCDWPEN 528
+C +FN ++ CDWP+N
Sbjct: 206 NCPANLVFNPAISSCDWPKN 225
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 66 GEENPLIKLLHKHMSTYTVPPARTGHATPTPEWARPPSTPSD 191
G + P + H+H V R G A PT +RPP P D
Sbjct: 64 GRQGPAV---HQHHQMVQVHTRRLGGAAPTMHHSRPPPPPLD 102
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 18 GAMTWAIDMDDFKG 59
G M WAID DD +G
Sbjct: 367 GVMIWAIDFDDDQG 380
Score = 23.0 bits (47), Expect(2) = 3.0
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 39 DMDDFKGLCGEENPLI 86
D ++ G+CG+ +PLI
Sbjct: 416 DNEELAGMCGKSSPLI 431
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 206 SDSYHNHHHRETDDNKNHREANYYHNESTPWHH 304
+ S H+HH +++K+H ++ H+ W H
Sbjct: 91 NQSGHDHHIHNNEEHKHHNMRSHDHHTMKMWFH 123
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = +2
Query: 215 YHNHHHRETDDNKNHREANYYHNESTPWHH*RRL*HQRETGSRGTTHG 358
+H HH + +H E +H HH H G GT HG
Sbjct: 505 HHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPA--HHGHHGEHGTHHG 550
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/80 (25%), Positives = 30/80 (37%)
Frame = +2
Query: 116 HSPACAHWTRNSYSGMGASTFNSIRPI*G*SDSYHNHHHRETDDNKNHREANYYHNESTP 295
H A + + +S S +S+ +S + +H H E D +H H+E
Sbjct: 335 HKKAASSSSSSSSSSSSSSSSSSSESEDEKKHAPAHHEHHEHKDGAHHEHKEGEHHEHAA 394
Query: 296 WHH*RRL*HQRETGSRGTTH 355
HH H R G TH
Sbjct: 395 -HHDEHGVHHRHHGEHHGTH 413
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +2
Query: 215 YHNHHHRETDDNKNHREANYYHNESTPWHH*RR-----L*HQRETGSRGTTHG 358
+H HH +++H +H+ S HH L H G GT HG
Sbjct: 626 HHGAHHHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHG 678
>AC006635-1|AAY86194.1| 201|Caenorhabditis elegans Hypothetical
protein F38G1.3 protein.
Length = 201
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +2
Query: 101 AYEHLHSPACAHWTRNSYSGMGASTFNSIRPI*G*SDSYHNHHHRETDDNKNHREANYYH 280
A+EH+ C + S +T I P +H+HHH+E + + + +
Sbjct: 105 AFEHIQKCECDVCRSPTTSTSTTTTTTQITPSMHRKKHHHHHHHKENSSHYHKHDQLVFP 164
Query: 281 NES 289
N +
Sbjct: 165 NNT 167
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 212 SYHNHHHRETDDNKNHREANYYHNES 289
S H+H H D N +H+E ++ H+ S
Sbjct: 140 SPHDHSHDHHDHNHSHKEHDHSHDHS 165
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 206 SDSYHNHHHRETDDNKNHREAN 271
SDS+H H R D++ H++ N
Sbjct: 151 SDSHHGHQKRSVDEHHGHQKKN 172
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 123 PPARTGHATPTPEWARPPSTPSDPSEGDP 209
PP R TP RPP TP P +P
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSPEPRNP 183
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 218 HNHHHRETDDNKNHREANYYH 280
H HHR DD +HR++N+ H
Sbjct: 150 HKDHHRR-DDKHHHRDSNHRH 169
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 206 SDSYHNHHHRETDDNKNHREANY--YHNESTPWHH*RRL*HQRETGSRGTTHGKRS 367
S H+H HR + D+++HR ++ H E RR R S + +RS
Sbjct: 277 STEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRRDDRHRSERSERSERSERS 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,117,902
Number of Sequences: 27780
Number of extensions: 303758
Number of successful extensions: 1140
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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