SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5172
         (335 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009302-1|AAH09302.2|  361|Homo sapiens ATP13A1 protein protein.      31   1.2  
AK172778-1|BAD18759.1|  976|Homo sapiens protein ( Homo sapiens ...    31   1.2  
AK125861-1|BAC86325.1|  367|Homo sapiens protein ( Homo sapiens ...    31   1.2  
AK123780-1|BAC85690.1|  367|Homo sapiens protein ( Homo sapiens ...    31   1.2  
AK026044-1|BAB15334.1|  344|Homo sapiens protein ( Homo sapiens ...    31   1.2  
AF288687-1|AAG01173.1| 1086|Homo sapiens CGI-152 protein protein.      31   1.2  
AB058728-1|BAB47454.1| 1203|Homo sapiens KIAA1825 protein protein.     31   1.2  
BX088650-9|CAM26300.1|  242|Homo sapiens PHD finger protein 1 pr...    29   2.7  
BC064514-1|AAH64514.1|  237|Homo sapiens CORO6 protein protein.        29   2.7  
AL662799-10|CAM25569.1|  242|Homo sapiens PHD finger protein 1 p...    29   2.7  
AK027777-1|BAB55360.1|  285|Homo sapiens protein ( Homo sapiens ...    29   2.7  
BX088650-8|CAM26299.1|  567|Homo sapiens PHD finger protein 1 pr...    29   4.7  
BC104911-1|AAI04912.1|  620|Homo sapiens GLIS family zinc finger...    29   4.7  
BC101799-1|AAI01800.1|  620|Homo sapiens GLIS family zinc finger...    29   4.7  
BC008834-1|AAH08834.1|  567|Homo sapiens PHD finger protein 1 pr...    29   4.7  
BC002446-1|AAH02446.1|  326|Homo sapiens DnaJ (Hsp40) homolog, s...    29   4.7  
AL662799-9|CAI18272.1|  567|Homo sapiens PHD finger protein 1 pr...    29   4.7  
AL591720-1|CAH72026.1|  620|Homo sapiens GLIS family zinc finger...    29   4.7  
AL050332-3|CAC38366.1|  567|Homo sapiens PHD finger protein 1 pr...    29   4.7  
AL021366-5|CAA16159.1|  567|Homo sapiens cICK0721Q.4.2 (PHD fing...    29   4.7  
AK223601-1|BAD97321.1|  326|Homo sapiens DnaJ (Hsp40) homolog, s...    29   4.7  
AK093474-1|BAC04178.1|  368|Homo sapiens protein ( Homo sapiens ...    29   4.7  
AK090634-1|BAC03494.1|  620|Homo sapiens protein ( Homo sapiens ...    29   4.7  
AF052205-1|AAC13273.1|  567|Homo sapiens PHD finger protein 2 pr...    29   4.7  
AC006372-1|AAS07521.1|   95|Homo sapiens unknown protein.              29   4.7  
AB209859-1|BAD93096.1|  335|Homo sapiens DnaJ (Hsp40) homolog, s...    29   4.7  
AB015798-1|BAA88769.1|  326|Homo sapiens DnaJ homolog protein.         29   4.7  
AK074920-1|BAC11294.1|  572|Homo sapiens protein ( Homo sapiens ...    28   8.2  

>BC009302-1|AAH09302.2|  361|Homo sapiens ATP13A1 protein protein.
          Length = 361

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 144 GVVSASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTA 299
           GV   +  P   V+R RRPR +    ++ I+A     K R    P+EE+ T+
Sbjct: 35  GVALLANAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSEEQPTS 86


>AK172778-1|BAD18759.1|  976|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23939 fis, clone HEP01940, highly similar to
           Cation-transporting ATPase 2 (EC 3.6.3.-). ).
          Length = 976

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 144 GVVSASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTA 299
           GV   +  P   V+R RRPR +    ++ I+A     K R    P+EE+ T+
Sbjct: 650 GVALLANAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSEEQPTS 701


>AK125861-1|BAC86325.1|  367|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43873 fis, clone TESTI4008429, highly  similar
           to Probable cation-transporting ATPase 2 (EC 3.6.3.-).
           ).
          Length = 367

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 144 GVVSASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTA 299
           GV   +  P   V+R RRPR +    ++ I+A     K R    P+EE+ T+
Sbjct: 18  GVALLANAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSEEQPTS 69


>AK123780-1|BAC85690.1|  367|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41786 fis, clone KIDNE2001361, highly  similar
           to Mus musculus catp mRNA for cation-transporting
           atpase. ).
          Length = 367

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 144 GVVSASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTA 299
           GV   +  P   V+R RRPR +    ++ I+A     K R    P+EE+ T+
Sbjct: 18  GVALLANAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSEEQPTS 69


>AK026044-1|BAB15334.1|  344|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22391 fis, clone HRC07832. ).
          Length = 344

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 144 GVVSASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTA 299
           GV   +  P   V+R RRPR +    ++ I+A     K R    P+EE+ T+
Sbjct: 18  GVALLANAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSEEQPTS 69


>AF288687-1|AAG01173.1| 1086|Homo sapiens CGI-152 protein protein.
          Length = 1086

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 144 GVVSASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTA 299
           GV   +  P   V+R RRPR +    ++ I+A     K R    P+EE+ T+
Sbjct: 760 GVALLANAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSEEQPTS 811


>AB058728-1|BAB47454.1| 1203|Homo sapiens KIAA1825 protein protein.
          Length = 1203

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 144  GVVSASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTA 299
            GV   +  P   V+R RRPR +    ++ I+A     K R    P+EE+ T+
Sbjct: 877  GVALLANAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSEEQPTS 928


>BX088650-9|CAM26300.1|  242|Homo sapiens PHD finger protein 1
           protein.
          Length = 242

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = +3

Query: 153 SASEGPPEGVQRS----RRPRPAVLRQHAMIKAED*EEKS--RHRPAPTEERGTA 299
           S  +GP  GV R     RRP P  LR+    K E+    S  R++P P E+R  A
Sbjct: 43  SPGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERA 97


>BC064514-1|AAH64514.1|  237|Homo sapiens CORO6 protein protein.
          Length = 237

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +3

Query: 168 PPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTALGRCVVNLNAGT 335
           PP G +RS+    A L QH +    +  +  R R    E+R TAL   +  L  GT
Sbjct: 181 PPSGPRRSQSASDAPLSQHTLETLLEEIKALRERVQAQEQRITALENMLCELVDGT 236


>AL662799-10|CAM25569.1|  242|Homo sapiens PHD finger protein 1
           protein.
          Length = 242

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = +3

Query: 153 SASEGPPEGVQRS----RRPRPAVLRQHAMIKAED*EEKS--RHRPAPTEERGTA 299
           S  +GP  GV R     RRP P  LR+    K E+    S  R++P P E+R  A
Sbjct: 43  SPGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERA 97


>AK027777-1|BAB55360.1|  285|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14871 fis, clone PLACE1002591, moderately
           similar to CORONIN-LIKE PROTEIN P57. ).
          Length = 285

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +3

Query: 168 PPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTALGRCVVNLNAGT 335
           PP G +RS+    A L QH +    +  +  R R    E+R TAL   +  L  GT
Sbjct: 229 PPSGPRRSQSASDAPLSQHTLETLLEEIKALRERVQAQEQRITALENMLCELVDGT 284


>BX088650-8|CAM26299.1|  567|Homo sapiens PHD finger protein 1
           protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
 Frame = +3

Query: 156 ASEGPPEGVQRS----RRPRPAVLRQHAMIKAED*EEKS--RHRPAPTEERGTA 299
           + +GP  GV R     RRP P  LR+    K E+    S  R++P P E+R  A
Sbjct: 353 SGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERA 406


>BC104911-1|AAI04912.1|  620|Homo sapiens GLIS family zinc finger 1
           protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -3

Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
           ++S    L P P   S  DG+G  LL+P +  L+ + GPP    +S +H
Sbjct: 434 TTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGL-GPPPLPPSSQSH 481


>BC101799-1|AAI01800.1|  620|Homo sapiens GLIS family zinc finger 1
           protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -3

Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
           ++S    L P P   S  DG+G  LL+P +  L+ + GPP    +S +H
Sbjct: 434 TTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGL-GPPPLPPSSQSH 481


>BC008834-1|AAH08834.1|  567|Homo sapiens PHD finger protein 1
           protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
 Frame = +3

Query: 156 ASEGPPEGVQRS----RRPRPAVLRQHAMIKAED*EEKS--RHRPAPTEERGTA 299
           + +GP  GV R     RRP P  LR+    K E+    S  R++P P E+R  A
Sbjct: 353 SGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERA 406


>BC002446-1|AAH02446.1|  326|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily B, member 6 protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +3

Query: 153 SASEGPPEGVQRSRRPRPAVLRQHA--MIKAED*EEKSRHRPAPTEERGTALG 305
           +A    P G++  + PRPA L +HA   +  E+ E+     P P +   +A G
Sbjct: 248 NALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG 300


>AL662799-9|CAI18272.1|  567|Homo sapiens PHD finger protein 1
           protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
 Frame = +3

Query: 156 ASEGPPEGVQRS----RRPRPAVLRQHAMIKAED*EEKS--RHRPAPTEERGTA 299
           + +GP  GV R     RRP P  LR+    K E+    S  R++P P E+R  A
Sbjct: 353 SGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERA 406


>AL591720-1|CAH72026.1|  620|Homo sapiens GLIS family zinc finger 1
           protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -3

Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
           ++S    L P P   S  DG+G  LL+P +  L+ + GPP    +S +H
Sbjct: 434 TTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGL-GPPPLPPSSQSH 481


>AL050332-3|CAC38366.1|  567|Homo sapiens PHD finger protein 1
           protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
 Frame = +3

Query: 156 ASEGPPEGVQRS----RRPRPAVLRQHAMIKAED*EEKS--RHRPAPTEERGTA 299
           + +GP  GV R     RRP P  LR+    K E+    S  R++P P E+R  A
Sbjct: 353 SGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERA 406


>AL021366-5|CAA16159.1|  567|Homo sapiens cICK0721Q.4.2 (PHD finger
           protein 2 (variant 2)) protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
 Frame = +3

Query: 156 ASEGPPEGVQRS----RRPRPAVLRQHAMIKAED*EEKS--RHRPAPTEERGTA 299
           + +GP  GV R     RRP P  LR+    K E+    S  R++P P E+R  A
Sbjct: 353 SGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERA 406


>AK223601-1|BAD97321.1|  326|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily B, member 6 isoform a variant protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +3

Query: 153 SASEGPPEGVQRSRRPRPAVLRQHA--MIKAED*EEKSRHRPAPTEERGTALG 305
           +A    P G++  + PRPA L +HA   +  E+ E+     P P +   +A G
Sbjct: 248 NALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG 300


>AK093474-1|BAC04178.1|  368|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36155 fis, clone TESTI2025499, moderately
           similar to ZINC FINGER PROTEIN GLI3. ).
          Length = 368

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -3

Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
           ++S    L P P   S  DG+G  LL+P +  L+ + GPP    +S +H
Sbjct: 182 TTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGL-GPPPLPPSSQSH 229


>AK090634-1|BAC03494.1|  620|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33315 fis, clone BNGH42007037, moderately
           similar to ZINC FINGER PROTEIN GLI1 (GLI). ).
          Length = 620

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -3

Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
           ++S    L P P   S  DG+G  LL+P +  L+ + GPP    +S +H
Sbjct: 434 TTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGL-GPPPLPPSSQSH 481


>AF052205-1|AAC13273.1|  567|Homo sapiens PHD finger protein 2
           protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
 Frame = +3

Query: 156 ASEGPPEGVQRS----RRPRPAVLRQHAMIKAED*EEKS--RHRPAPTEERGTA 299
           + +GP  GV R     RRP P  LR+    K E+    S  R++P P E+R  A
Sbjct: 353 SGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERA 406


>AC006372-1|AAS07521.1|   95|Homo sapiens unknown protein.
          Length = 95

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +3

Query: 153 SASEGPPEGVQRSRRPRPAVLRQHA--MIKAED*EEKSRHRPAPTEERGTALG 305
           +A    P G++  + PRPA L +HA   +  E+ E+     P P +   +A G
Sbjct: 17  NALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG 69


>AB209859-1|BAD93096.1|  335|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily B, member 6 isoform a variant protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +3

Query: 153 SASEGPPEGVQRSRRPRPAVLRQHA--MIKAED*EEKSRHRPAPTEERGTALG 305
           +A    P G++  + PRPA L +HA   +  E+ E+     P P +   +A G
Sbjct: 249 NALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG 301


>AB015798-1|BAA88769.1|  326|Homo sapiens DnaJ homolog protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +3

Query: 153 SASEGPPEGVQRSRRPRPAVLRQHA--MIKAED*EEKSRHRPAPTEERGTALG 305
           +A    P G++  + PRPA L +HA   +  E+ E+     P P +   +A G
Sbjct: 248 NALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG 300


>AK074920-1|BAC11294.1|  572|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90439 fis, clone NT2RP3000907, weakly similar to
           PROBABLE CALCIUM-TRANSPORTING ATPASE 6 (EC 3.6.1.38). ).
          Length = 572

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +3

Query: 144 GVVSASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEERGTA 299
           GV   +  P   V+R RRPR +    ++ I+A     K R    P+E + T+
Sbjct: 246 GVALLANAPERVVERRRRPRDSPTLSNSGIRATSRTAKQRSGLPPSEGQPTS 297


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,956,111
Number of Sequences: 237096
Number of extensions: 932055
Number of successful extensions: 3413
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3398
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -