Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5172
(335 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptio... 28 3.5
AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj prot... 28 3.5
AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240... 28 3.5
AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 prot... 28 3.5
AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD... 28 3.5
AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC... 28 3.5
AY051757-1|AAK93181.1| 609|Drosophila melanogaster LD28993p pro... 27 8.0
AE014298-1462|AAS65307.1| 609|Drosophila melanogaster CG2890-PC... 27 8.0
AE014298-1461|AAN09262.1| 609|Drosophila melanogaster CG2890-PB... 27 8.0
AE014298-1460|AAF46594.2| 609|Drosophila melanogaster CG2890-PA... 27 8.0
>AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptional
coactivator blindspot protein.
Length = 2618
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
S++PRT L P P G +LLN L PPG + H
Sbjct: 1265 SAAPRTPLTPSTVPQPLSSGGSQYLLN----QLNCPQAPPGASMQQLMH 1309
>AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj protein.
Length = 2618
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
S++PRT L P P G +LLN L PPG + H
Sbjct: 1265 SAAPRTPLTPSTVPQPLSSGGSQYLLN----QLNCPQAPPGASMQQLMH 1309
>AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240
protein.
Length = 2618
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
S++PRT L P P G +LLN L PPG + H
Sbjct: 1265 SAAPRTPLTPSTVPQPLSSGGSQYLLN----QLNCPQAPPGASMQQLMH 1309
>AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 protein.
Length = 2618
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
S++PRT L P P G +LLN L PPG + H
Sbjct: 1265 SAAPRTPLTPSTVPQPLSSGGSQYLLN----QLNCPQAPPGASMQQLMH 1309
>AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD,
isoform D protein.
Length = 2618
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
S++PRT L P P G +LLN L PPG + H
Sbjct: 1265 SAAPRTPLTPSTVPQPLSSGGSQYLLN----QLNCPQAPPGASMQQLMH 1309
>AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC,
isoform C protein.
Length = 2618
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 324 SSSPRTFLVPYPAPPSAPDGVGSFLLNPQL*SLRAVAGPPGEDVASAAH 178
S++PRT L P P G +LLN L PPG + H
Sbjct: 1265 SAAPRTPLTPSTVPQPLSSGGSQYLLN----QLNCPQAPPGASMQQLMH 1309
>AY051757-1|AAK93181.1| 609|Drosophila melanogaster LD28993p
protein.
Length = 609
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 156 ASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEER 290
A G V++S P ++ +KAE+ +E+ +H P TE++
Sbjct: 354 AQLGDKAVVKKSTPPADGENQEPVKVKAENEKEEKKHAPIKTEKQ 398
>AE014298-1462|AAS65307.1| 609|Drosophila melanogaster CG2890-PC,
isoform C protein.
Length = 609
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 156 ASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEER 290
A G V++S P ++ +KAE+ +E+ +H P TE++
Sbjct: 354 AQLGDKAVVKKSTPPADGENQEPVKVKAENEKEEKKHAPIKTEKQ 398
>AE014298-1461|AAN09262.1| 609|Drosophila melanogaster CG2890-PB,
isoform B protein.
Length = 609
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 156 ASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEER 290
A G V++S P ++ +KAE+ +E+ +H P TE++
Sbjct: 354 AQLGDKAVVKKSTPPADGENQEPVKVKAENEKEEKKHAPIKTEKQ 398
>AE014298-1460|AAF46594.2| 609|Drosophila melanogaster CG2890-PA,
isoform A protein.
Length = 609
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 156 ASEGPPEGVQRSRRPRPAVLRQHAMIKAED*EEKSRHRPAPTEER 290
A G V++S P ++ +KAE+ +E+ +H P TE++
Sbjct: 354 AQLGDKAVVKKSTPPADGENQEPVKVKAENEKEEKKHAPIKTEKQ 398
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,344,739
Number of Sequences: 53049
Number of extensions: 284681
Number of successful extensions: 1084
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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