Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5167
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009428-1|AAH09428.1|  152|Homo sapiens fission 1 (mitochondria...    95   2e-19
BC003540-1|AAH03540.1|  152|Homo sapiens fission 1 (mitochondria...    95   2e-19
AC006329-1|AAP22366.1|  152|Homo sapiens unknown protein.              95   2e-19
AF151893-1|AAD34130.1|  152|Homo sapiens CGI-135 protein protein.      93   9e-19

>BC009428-1|AAH09428.1|  152|Homo sapiens fission 1 (mitochondrial
           outer membrane) homolog (S. cerevisiae) protein.
          Length = 152

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   LVRSKYPTDIRKGILLLKELF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIE 179
           LVRSKY  DIRKGI+LL+EL      E +RDY+FYLA+GN R+KEY KAL YV+  L+ E
Sbjct: 42  LVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 101

Query: 180 PANQQVLALERQINKRMEKE 239
           P N Q   LER I+K M+K+
Sbjct: 102 PQNNQAKELERLIDKAMKKD 121


>BC003540-1|AAH03540.1|  152|Homo sapiens fission 1 (mitochondrial
           outer membrane) homolog (S. cerevisiae) protein.
          Length = 152

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   LVRSKYPTDIRKGILLLKELF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIE 179
           LVRSKY  DIRKGI+LL+EL      E +RDY+FYLA+GN R+KEY KAL YV+  L+ E
Sbjct: 42  LVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 101

Query: 180 PANQQVLALERQINKRMEKE 239
           P N Q   LER I+K M+K+
Sbjct: 102 PQNNQAKELERLIDKAMKKD 121


>AC006329-1|AAP22366.1|  152|Homo sapiens unknown protein.
          Length = 152

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   LVRSKYPTDIRKGILLLKELF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIE 179
           LVRSKY  DIRKGI+LL+EL      E +RDY+FYLA+GN R+KEY KAL YV+  L+ E
Sbjct: 42  LVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 101

Query: 180 PANQQVLALERQINKRMEKE 239
           P N Q   LER I+K M+K+
Sbjct: 102 PQNNQAKELERLIDKAMKKD 121


>AF151893-1|AAD34130.1|  152|Homo sapiens CGI-135 protein protein.
          Length = 152

 Score = 92.7 bits (220), Expect = 9e-19
 Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   LVRSKYPTDIRKGILLLKELF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIE 179
           LVR++Y  DIRKGI+LL+EL      E +RDY+FYLA+GN R+KEY KAL YV+  L+ E
Sbjct: 42  LVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 101

Query: 180 PANQQVLALERQINKRMEKE 239
           P N Q   LER I+K M+K+
Sbjct: 102 PQNNQAKELERLIDKAMKKD 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,135,529
Number of Sequences: 237096
Number of extensions: 1473421
Number of successful extensions: 3031
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3027
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)