Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5166
(464 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0509 - 4029739-4029890,4031064-4031208,4031665-4031709,403... 41 6e-04
11_06_0281 + 21881382-21881538,21882162-21882394,21882783-218828... 36 0.016
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57... 30 0.80
04_04_0917 - 29404341-29404519,29404610-29404744,29404898-294052... 30 1.1
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 29 1.4
10_08_0931 - 21647562-21649037 29 1.8
04_04_0915 - 29385926-29385952,29386069-29386285,29386367-293866... 28 3.2
02_04_0224 - 21059328-21059888,21060388-21060462,21060715-210607... 28 4.3
11_06_0636 - 25711965-25712232,25712438-25712502,25713033-257132... 27 5.6
11_04_0471 - 18121023-18121213,18121954-18122080,18122221-181222... 27 5.6
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 27 5.6
06_01_1018 - 7964752-7964847,7964976-7967048 27 5.6
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 27 7.4
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 27 7.4
05_03_0061 + 7912322-7912658,7914617-7914747,7914875-7914938,791... 27 7.4
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 27 7.4
01_05_0535 - 23001864-23005052 27 7.4
09_04_0268 - 16253312-16253358,16253618-16253789,16253881-162543... 27 9.8
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 27 9.8
>12_01_0509 -
4029739-4029890,4031064-4031208,4031665-4031709,
4031800-4031899,4032013-4032140,4032548-4032712,
4033033-4033162,4033252-4033412,4034306-4034351,
4034429-4034494,4034579-4034664,4035811-4035849
Length = 420
Score = 40.7 bits (91), Expect = 6e-04
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 235 LSPQDLEPAEPPEKVLDEVTLDGIGRWIKSDRCKKIITLSGAGISTCAGIPDFRSPETGL 414
L + + P P D +D + R+I D+ KK++ L+GAG+ST +GIPD+RSP G
Sbjct: 15 LRDKQIVPDSDPPSAKD---VDLLYRFI--DQSKKLMVLTGAGMSTESGIPDYRSP-NGA 68
Query: 415 Y 417
Y
Sbjct: 69 Y 69
>11_06_0281 +
21881382-21881538,21882162-21882394,21882783-21882869,
21882920-21883396
Length = 317
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2
Query: 277 LFRVVLPVQDPEGSRVRVLRPSTFERHPRRDRETYF*GFPS 155
LF + LP+QDP+ R R RP + HPRR R GFP+
Sbjct: 166 LFLLRLPLQDPDRRRAR-RRPHPLDAHPRRRRGHRTAGFPA 205
>07_01_0077 +
566895-567127,567207-567331,571204-571340,571437-571542,
571635-571885,572018-572128,572209-572320,572626-572716,
573168-573507,573678-573900,573946-574204,574274-574481,
574572-574622,574712-574870,574956-575120,575322-575399,
575732-576031,576107-576259,576871-576918,577019-577188,
577738-577852,578462-578623,578789-578893,578969-579199,
579277-579410,579484-579738,579822-580110,580214-580306,
580395-580520,580646-580897
Length = 1693
Score = 30.3 bits (65), Expect = 0.80
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 318 QER*VQEDHNTFRSWYFYLC-WNSRLP*SRNRIIS*LTEVRTTSTTGD 458
QE Q+D N F W FYLC W P S+ +II L ++T D
Sbjct: 649 QEGGPQDDGNLFTRW-FYLCMWYKDDPHSQEKIIYYLARLKTKDILRD 695
>04_04_0917 -
29404341-29404519,29404610-29404744,29404898-29405225,
29405313-29405532,29405653-29406647,29407233-29407493,
29407534-29407872,29409309-29409497
Length = 881
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +1
Query: 13 GSNCQYWTKVSRRNFVFLRKMSANSPPGKSGGHETVDESPQNVPPTTSMESLRNMFRDLD 192
GSN +K R F+ + S GGHET +++ +++ T + ++ + + L
Sbjct: 719 GSNVT--SKNYERKFLASKIFGPYSFINVDGGHETAEKNGRSLKNTIEVATVLRIVQRLF 776
Query: 193 VDDVRMYLALKLGLLSPQDLEPAEPPEKV 279
+ V L +G++SP + + EKV
Sbjct: 777 KEAVSTQSKLSVGVVSPYNAQVRAIQEKV 805
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 145 PTTSMESLRNMFRDLDVDDVRMYLALKLGLLSPQDLEPAEP--PEKVLDEVTLDGIGRWI 318
P + SLR R+L ++ V +YL + P ++P P P K D V D G W
Sbjct: 94 PGLVLPSLRESLRNLQMEYVDLYL-----VHWPISVKPGPPMLPVKREDAVPFDFEGVWR 148
Query: 319 KSDRCKKIITLSGAGIS 369
+ C ++ G+S
Sbjct: 149 AMEECHRLGLAKAIGVS 165
>10_08_0931 - 21647562-21649037
Length = 491
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 67 RKMSANSPPGKSGGHETVDESP 132
R++S ++P G GGHETV SP
Sbjct: 196 RRISQDTPGGGGGGHETVLPSP 217
>04_04_0915 -
29385926-29385952,29386069-29386285,29386367-29386622,
29386745-29387072,29387157-29387587,29388014-29388163,
29388212-29388398,29388709-29388750,29389007-29389555,
29389778-29390032
Length = 813
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +1
Query: 103 GGHETVDESPQNVPPTTSMESLRNMFRDLDVDDVRMYLALKLGLLSPQDLEPAEPPEKV 279
GGHET ++ +++ T + ++ + R L + V + L +G++SP + + EK+
Sbjct: 617 GGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQVRAIQEKI 675
>02_04_0224 -
21059328-21059888,21060388-21060462,21060715-21060798,
21060866-21061183,21061511-21061722,21061766-21062030
Length = 504
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 382 IPDFRSPETGLYHNLQKYELPQPQAI 459
+ D R P+ ++ N ++Y+LP+P I
Sbjct: 277 VRDGRGPDCNIWSNFEQYKLPEPLCI 302
>11_06_0636 -
25711965-25712232,25712438-25712502,25713033-25713296,
25713405-25713854
Length = 348
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 107 VMKPWMSHRRMSRQQLRWKASEICFAISTWMT 202
VM P +SH +++ WK SEI S + T
Sbjct: 208 VMNPALSHHQLANNSAWWKQSEINTGSSNYST 239
>11_04_0471 -
18121023-18121213,18121954-18122080,18122221-18122253,
18122969-18123009,18123415-18123484,18123626-18123744,
18123876-18123942,18124735-18124809,18125023-18125050,
18125130-18125179,18125679-18125741,18125829-18125870,
18126000-18126078,18127233-18127368,18128013-18128517,
18129238-18129372
Length = 586
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 250 LEPAEPPEKVLDEVTLDGIGRWIKSDR 330
+E A PEK EV + +GRW + +R
Sbjct: 43 MEEAVEPEKPASEVEAEVVGRWSRRER 69
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 145 PTTSMESLRNMFRDLDVDDVRMYLALKLGLLSPQDLEPAEPPEKVL----DEVTLDGIGR 312
P + SLR R + ++ + +YL + P + AE PE + D V +D G
Sbjct: 91 PGHVLPSLRRALRKMQMEYLDLYL-----IHFPVSMRLAEDPESMTYSKDDLVMMDMEGV 145
Query: 313 WIKSDRCKKIITLSGAGIS 369
W + + C+++ G+S
Sbjct: 146 WKEMEECQRLGLTKAIGVS 164
>06_01_1018 - 7964752-7964847,7964976-7967048
Length = 722
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 190 DVDDVRMYLALKLGLLSPQDLEPAEPPEKVLDEVTLDG 303
D D L LKLGLL A PP +++ +V LDG
Sbjct: 617 DYDHEEAALVLKLGLLCTHPAPAARPPMRLVVQV-LDG 653
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 27.1 bits (57), Expect = 7.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 275 KFWMKSPLMVLAGGSRAIGARRS*HFQELVFLPVLEFQTSVVPKQDYIITYRSTNYL 445
K W KS ++A + +G + + H Q L L T ++ +DYII YR ++L
Sbjct: 406 KLWEKS---LIAKVAVKVGIQNTNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFL 459
>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +1
Query: 271 EKVLDEVTLDGIGRWIKSDRCKKIIT---LSGAGISTCAG 381
E +++++ L+G G+ +K R KIIT L AG + +G
Sbjct: 1199 EDIINQLQLEGDGKLLKKGRVNKIITKRALKAAGHTDLSG 1238
>05_03_0061 +
7912322-7912658,7914617-7914747,7914875-7914938,
7915286-7915512,7915869-7916396,7916860-7916919
Length = 448
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 88 PPG-KSGGHETVDESPQN-VPPTTSMESLRNMFRDLDVDDVRMYLALK 225
PPG KS ++ + + Q V TTS +R +FR+ D+D+ M + ++
Sbjct: 310 PPGDKSFSNKRSNATEQQAVLSTTSEGRIRRLFREKDLDNSEMVITVQ 357
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 27.1 bits (57), Expect = 7.4
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 145 PTTSMESLRNMFRDLDVDDVRMYLALKLGLLSPQDLEPAEPPEKVLDEVTLDGIGRWIKS 324
P + SLR R+L ++ V +YL + P P P K D V D G W
Sbjct: 94 PDLVLPSLRESLRNLQMEYVDLYLIHLPISVKP---GPMVFPVKKEDVVPFDFGGVWRAM 150
Query: 325 DRCKKIITLSGAGIS 369
+ C ++ G+S
Sbjct: 151 EECHRLGLAKAIGVS 165
>01_05_0535 - 23001864-23005052
Length = 1062
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +1
Query: 247 DLEPAEPPEKVLDEVTLDGIGRWIKSDRCKKIITLSGAGISTCAG 381
+LEP P VL IGRW D K + GA + AG
Sbjct: 887 ELEPQNPVNYVLSSKFHAAIGRW--EDTAKARAAMKGAAVKKEAG 929
>09_04_0268 -
16253312-16253358,16253618-16253789,16253881-16254359,
16255723-16255801,16255918-16255923
Length = 260
Score = 26.6 bits (56), Expect = 9.8
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +1
Query: 103 GGHETVDESPQNVPPTTSMESLRN--MFRDLDVDDVRMYLALKLGLLSPQDLEPAEPPEK 276
GG +V P+N P + ME L + + + + +A + P + E E E
Sbjct: 168 GGFTSVVPEPRNTFPQSRMEKLLKAILQKKIHPQNSSTLVAKRHLDWKPDETEINECLED 227
Query: 277 VLDEVTLDGIGRWIKSD-RCKK 339
L ++ DG +W+K+D C K
Sbjct: 228 ALRDLDDDG-AKWVKTDSECSK 248
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 130 PQNVPPTTSMESLRNMFRDLDVDDVRMYLALKLGLLSP 243
P P + M + + R L D MYL KLG L P
Sbjct: 2518 PITTRPKSQMWLVSSKMRILSADSCSMYLQRKLGWLDP 2555
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.135 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,409,890
Number of Sequences: 37544
Number of extensions: 285227
Number of successful extensions: 782
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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