Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5162
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46786-1|CAA86738.1|  581|Drosophila melanogaster acetyl-CoA syn...    29   2.3  
AE014296-3505|AAX52767.1|  581|Drosophila melanogaster CG9390-PC...    29   2.3  
BT021452-1|AAX33600.1|  632|Drosophila melanogaster AT28040p pro...    28   5.3  
AE014297-4126|AAF56711.2|  898|Drosophila melanogaster CG13978-P...    27   7.0  

>Z46786-1|CAA86738.1|  581|Drosophila melanogaster acetyl-CoA
           synthetase protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 64  LSLVMLICHCFRSHIISVSHNRLCDYRKL 150
           L++V L CHCFR       ++R   YRKL
Sbjct: 4   LTVVFLFCHCFREGNHPDDYSRGLTYRKL 32


>AE014296-3505|AAX52767.1|  581|Drosophila melanogaster CG9390-PC,
           isoform C protein.
          Length = 581

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 64  LSLVMLICHCFRSHIISVSHNRLCDYRKL 150
           L++V L CHCFR       ++R   YRKL
Sbjct: 4   LTVVFLFCHCFREGNHPDDYSRGLTYRKL 32


>BT021452-1|AAX33600.1|  632|Drosophila melanogaster AT28040p
           protein.
          Length = 632

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 274 SLAKSKYFIPSLAFLCVAYCNLP 206
           SL   K FIPS+ F+C  Y  +P
Sbjct: 518 SLVLLKIFIPSMIFICALYAMVP 540


>AE014297-4126|AAF56711.2|  898|Drosophila melanogaster CG13978-PA
           protein.
          Length = 898

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 274 SLAKSKYFIPSLAFLCVAYCNLP 206
           SL   K FIPS+ F+C  Y  +P
Sbjct: 784 SLVLLKIFIPSVIFICALYAMVP 806


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,674,065
Number of Sequences: 53049
Number of extensions: 232367
Number of successful extensions: 349
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)