Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5157
(601 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.52
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 29 0.69
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 28 0.91
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 28 0.91
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 28 1.2
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.1
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 27 2.1
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 26 4.8
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 25 6.4
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 25 6.4
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 25 8.5
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 25 8.5
SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.5
>SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 29.1 bits (62), Expect = 0.52
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 99 RKK*SVGSLTWSKATKTSQRKPIKLNRKRKCKEISSTQHGLHPP--TKPTRVSRNRSSKA 272
R+K + S + K + P K ++KRK E+S LH P + + +N++ K
Sbjct: 125 RRKQELVSKKAEASRKMEVKAPAKESKKRKVNELSQDVISLHSPKESNARKTKKNKNKKK 184
Query: 273 K 275
K
Sbjct: 185 K 185
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 28.7 bits (61), Expect = 0.69
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 391 VSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPK 504
+++ PT + PS P S KSV+RA+E P K
Sbjct: 194 ITEANPTCEKRKPSRSPSPMLSKKKSVARASENEPSAK 231
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 28.3 bits (60), Expect = 0.91
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +1
Query: 427 PSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPRAGPISESSP 591
P ++ +L S + S T Q P+ RPEP+ S CP P P
Sbjct: 117 PLSDSQLDTGDSPATSETTVQDYNPQVQSYCRPEPLSSNHVRSCPPFPPTQHHHP 171
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 28.3 bits (60), Expect = 0.91
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 111 SVGSLTWSKATKTSQRKPIKLNRKRKCKEISSTQHGLHPPTKPTRVSRNRSSKAKISI 284
S+ L S A K Q+ P K R+R S + GL+P PT S+ RS + S+
Sbjct: 342 SLSPLDHSSAEKEMQKAPAKNKRRRT----GSLETGLYPKESPT-PSKKRSKRVLWSL 394
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 349 SKPGQLWWVSNPRTVSKLRPTIRESIPSAEPKLPR---SGSKSVSRATEQFPEPKSGPV 516
+KPG+ V + K + + + S E K+ R S S+S+S TEQ PK PV
Sbjct: 150 TKPGEPE-VKQETNLQKEKKESKVKLESKEEKISRNLRSSSRSISPVTEQPQSPKIQPV 207
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 388 TVSKLRPTIRESIPSAEPKLPRSGSKSVS 474
TVS P+ E PS+ P LP +GS+S S
Sbjct: 114 TVSIASPSTPELPPSSSPLLPPNGSESSS 142
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 27.1 bits (57), Expect = 2.1
Identities = 25/83 (30%), Positives = 35/83 (42%)
Frame = +1
Query: 346 NSKPGQLWWVSNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARP 525
+SKP + V +PT S PSA P +S ++ P + A+P
Sbjct: 273 HSKPSETVKSEQETAVEHPKPTATTSAPSASPTGVPVEEESHKATSDAVPPAE----AKP 328
Query: 526 EPVWSEPT*LCPRAGPISESSPI 594
EPV P RA P SES+ +
Sbjct: 329 EPV---PASAAERA-PTSESTTV 347
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 135 KATKTSQRKPIKLNRKRKCKEISSTQHGL---HPPTKPTRVSRNRSSKAKISI 284
+ TKT R+ K+ R+RK + +++ P KP SR K ++
Sbjct: 532 RVTKTQSRRETKVKRRRKARIQETSEESTVVNEPNEKPDGRSRRERKKVNYAL 584
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 542 SLHTGSGLATGPDFGSGNCSVALETDFE 459
S+H+ G D G+GN + LETD E
Sbjct: 15 SVHSREVSVNGSDSGTGNDAYKLETDDE 42
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 162 PIKLNRKRKCKEISSTQHGLHPPTKPTRVSRNRSSKAKISITIML 296
P +LNR R KE + LH +R + +SS SI++ L
Sbjct: 113 PKRLNRSRSSKEDMYRRRSLHGLPSLSRRNSKKSSTLSRSISLHL 157
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 8.5
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +1
Query: 370 WVSNPRTVSKLRPTIRESIPSAEP---KLPRSGSKSVSRATEQFPEPKSGPVARPEPVWS 540
W+SN + + ++ +SIP+ P L RS S +T P + P +P+ + +
Sbjct: 956 WISNTKQSFDKKSSLIDSIPALSPAPSSLARSSVSSQRSSTSIIPIKPNKP-TKPDHLVA 1014
Query: 541 ---EPT*LCPRAGPISESSP 591
+P L PR+G S P
Sbjct: 1015 PRVKPL-LPPRSGSSSSGVP 1033
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Frame = +1
Query: 484 EQFPEPKSGPVARPEPVWSEP--------T*LCPRAGPISESSPI 594
+ FP+P S PV E V EP + P+A P++ES +
Sbjct: 493 KSFPKPASSPVTFSEDVKKEPSEEKKLEVSDEAPKAAPLAESKKV 537
>SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/38 (23%), Positives = 21/38 (55%)
Frame = +3
Query: 138 ATKTSQRKPIKLNRKRKCKEISSTQHGLHPPTKPTRVS 251
++ +RKP + + K +S+ + + PT PT+++
Sbjct: 80 SSSEDERKPARHPQSSSQKPFASSTYNVELPTSPTKIT 117
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,139,110
Number of Sequences: 5004
Number of extensions: 42104
Number of successful extensions: 162
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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