Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5157
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    27   0.46 
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            27   0.46 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.81 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   1.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   10.0 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   10.0 

>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 427 PSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWS 540
           PS+ P + RSG+  V+ +   F  PK   + + E  W+
Sbjct: 222 PSSPPAIRRSGTLEVTFSERTFVTPKRESMEQAEQEWT 259


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 427 PSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWS 540
           PS+ P + RSG+  V+ +   F  PK   + + E  W+
Sbjct: 222 PSSPPAIRRSGTLEVTFSERTFVTPKRESMEQAEQEWT 259


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 26.2 bits (55), Expect = 0.81
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 159 CVGLFLWLWTMSMTPPIIFSGMWRTFRGSNSAVV 58
           CV  +++L+   ++P I F G+  T  G+N A +
Sbjct: 524 CVASWIFLYFACLSPIITFGGLLGTATGNNIAAM 557


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
 Frame = +1

Query: 349 SKPGQLWWVSNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRAT--EQFPEPKSGPVAR 522
           S+P    +   PR   K  P++    P   P LP+       R T    FP P S    R
Sbjct: 107 SQPPTTRFAPEPRAEVKFVPSVPLKTPPVRPLLPQQQQHPHQRDTGPALFPAPIS---HR 163

Query: 523 PEPV 534
           P P+
Sbjct: 164 PPPI 167


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 351  GIVGLTVAGYVPVGTAG 301
            G+VG  + G+ PVG AG
Sbjct: 2727 GLVGGLIGGFAPVGIAG 2743


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 64  SAVGTTKGSPHSGKNNRWGH*HG 132
           S  G   GSP+ G  +   H HG
Sbjct: 692 SGGGLASGSPYGGGGHHLSHHHG 714


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 318  ERTQLQLVQQFQTRAAMVGLKPKDSFKTSPNN 413
            ++ Q Q  QQ Q  +    L+P     TSP N
Sbjct: 1316 QQQQQQQQQQHQPPSTQAQLRPSAPLNTSPPN 1347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,278
Number of Sequences: 2352
Number of extensions: 11152
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)