Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5155
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121644-1|AAM51971.1|  978|Drosophila melanogaster LD11689p pro...    33   0.29 
AJ289018-1|CAC17749.1|  978|Drosophila melanogaster calsyntenin-...    33   0.29 
AE014135-195|AAN06580.1|  978|Drosophila melanogaster CG11059-PB...    33   0.29 
AE014135-194|AAF59384.2|  978|Drosophila melanogaster CG11059-PA...    33   0.29 
AY121624-1|AAM51951.1|  151|Drosophila melanogaster GH18009p pro...    29   8.3  

>AY121644-1|AAM51971.1|  978|Drosophila melanogaster LD11689p
           protein.
          Length = 978

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
 Frame = +3

Query: 225 LNKPYIPFLFVIKMIN*--ILVSIRILKCKNYKSTTIKYCKIY-----NST*QVHIAV 377
           L KPY    F I+++N   IL + R L C+N KS   + C IY     ++T  VHI V
Sbjct: 76  LKKPYHEIPFKIELVNNLGILKARRTLNCENRKSYHFEICAIYCDGTPSNTANVHITV 133


>AJ289018-1|CAC17749.1|  978|Drosophila melanogaster calsyntenin-1
           protein protein.
          Length = 978

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
 Frame = +3

Query: 225 LNKPYIPFLFVIKMIN*--ILVSIRILKCKNYKSTTIKYCKIY-----NST*QVHIAV 377
           L KPY    F I+++N   IL + R L C+N KS   + C IY     ++T  VHI V
Sbjct: 76  LKKPYHEIPFKIELVNNLGILKARRTLNCENRKSYHFEICAIYCDGTPSNTANVHITV 133


>AE014135-195|AAN06580.1|  978|Drosophila melanogaster CG11059-PB,
           isoform B protein.
          Length = 978

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
 Frame = +3

Query: 225 LNKPYIPFLFVIKMIN*--ILVSIRILKCKNYKSTTIKYCKIY-----NST*QVHIAV 377
           L KPY    F I+++N   IL + R L C+N KS   + C IY     ++T  VHI V
Sbjct: 76  LKKPYHEIPFKIELVNNLGILKARRTLNCENRKSYHFEICAIYCDGTPSNTANVHITV 133


>AE014135-194|AAF59384.2|  978|Drosophila melanogaster CG11059-PA,
           isoform A protein.
          Length = 978

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
 Frame = +3

Query: 225 LNKPYIPFLFVIKMIN*--ILVSIRILKCKNYKSTTIKYCKIY-----NST*QVHIAV 377
           L KPY    F I+++N   IL + R L C+N KS   + C IY     ++T  VHI V
Sbjct: 76  LKKPYHEIPFKIELVNNLGILKARRTLNCENRKSYHFEICAIYCDGTPSNTANVHITV 133


>AY121624-1|AAM51951.1|  151|Drosophila melanogaster GH18009p
           protein.
          Length = 151

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 490 CCLFFKYSLYYILLFPLITLICVQFHL 410
           CC+   Y+L++  LF     +C+Q HL
Sbjct: 37  CCMHLSYTLFFFWLF-FFCFVCLQSHL 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,169,544
Number of Sequences: 53049
Number of extensions: 457277
Number of successful extensions: 799
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)