Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5154
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    24   4.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.2  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.2  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +1

Query: 439 RHHRVYRVKLACWAKPR--PSYPSASSKTGGDHGRI 540
           R +  Y+VK  CW K R     P      GG+H  I
Sbjct: 184 RAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHI 219


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 1   GRRAHVPFSHARKFRSSFGGYF 66
           GR  +VPFS A   R  FG  F
Sbjct: 223 GRAENVPFSSAHDERILFGNIF 244


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 1    GRRAHVPFSHARKFRSSFGGYFKNE 75
            G  AH P   +     SFG  F NE
Sbjct: 964  GYPAHEPLKRSNTMDGSFGRQFSNE 988


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 296 GLGRSW*HHRHNHAPQTEP 240
           G G    HH H+HA Q  P
Sbjct: 813 GAGSHHLHHLHHHAAQQPP 831


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,682
Number of Sequences: 2352
Number of extensions: 13301
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)