Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5153
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0967 - 23110154-23110240,23110620-23110673,23111010-231111... 65 6e-11
08_02_0714 + 20343864-20344385,20344928-20345098,20345933-203459... 62 6e-10
08_02_0970 - 23140109-23140192,23140604-23140657,23140783-231407... 61 8e-10
08_02_0710 + 20275834-20276352,20276970-20277140,20277692-202777... 60 2e-09
09_04_0371 - 17020539-17020607,17020697-17020747,17020888-170210... 58 5e-09
08_02_0711 + 20305341-20305859,20306278-20306448,20306995-203070... 58 5e-09
02_04_0092 + 19655747-19655825,19656362-19656567,19656990-196570... 56 4e-08
04_03_0863 + 20397161-20397239,20397464-20397672,20397768-203978... 50 3e-06
12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264... 47 1e-05
02_05_0490 + 29456825-29457499,29458771-29459057,29460922-294610... 33 0.23
11_01_0329 + 2471015-2471075,2471152-2471432 32 0.54
01_01_1021 + 8061007-8061150,8061244-8061708 31 0.71
09_06_0352 + 22472369-22472731,22472829-22472941,22473420-224742... 31 0.94
10_06_0035 - 9896289-9896390,9897394-9897503,9897587-9897715,989... 29 2.9
03_02_1016 + 13228113-13228964 29 2.9
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 29 2.9
09_02_0318 - 7191763-7191879,7192375-7192494,7192568-7192666,719... 29 5.0
07_01_0562 + 4175711-4175863,4175944-4176393 29 5.0
11_01_0808 - 7183656-7183671,7184062-7184324,7184768-7184857,718... 28 6.6
08_02_1078 + 24179558-24179936,24180577-24180634,24180721-241808... 28 6.6
03_03_0133 + 14727510-14727651,14727742-14728078,14728448-14728763 28 6.6
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 28 6.6
11_01_0800 - 7047425-7048253,7048340-7048927,7049050-7049268,704... 28 8.8
11_01_0330 + 2472195-2472743 28 8.8
10_02_0079 + 5016115-5016936 28 8.8
07_03_0722 + 20946201-20947327,20949531-20950791 28 8.8
07_03_0497 + 18777377-18777592,18777691-18778512 28 8.8
07_01_0439 + 3333654-3334217 28 8.8
06_01_0934 - 7212408-7212794,7212887-7213416,7214192-7214302,721... 28 8.8
>08_02_0967 -
23110154-23110240,23110620-23110673,23111010-23111177,
23111432-23111534,23111664-23111988,23112091-23112181
Length = 275
Score = 64.9 bits (151), Expect = 6e-11
Identities = 62/203 (30%), Positives = 85/203 (41%), Gaps = 7/203 (3%)
Frame = +2
Query: 128 ENGPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSIVNPGYC 295
E GP W + P+ G QSP+D+ RVK L L Y SIVN G+
Sbjct: 43 EKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDSYRAAEA-SIVNRGHD 101
Query: 296 WRVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHLVHWNTS 475
V +D + +N Y L+Q H H +EH+VDGR + ELH+VH +
Sbjct: 102 IMVR---FDGDAGSVVINGTAYYLRQLHWH------SPTEHSVDGRRYDMELHMVHESAE 152
Query: 476 KYHS-FG--EAAGKPDXXXXXXXXXXXXSKHRELDKVVQLLPFVQHKGDKVTFCEPLDPA 646
K + G G+PD R L K+ L + K D+ +DP
Sbjct: 153 KKAAVIGLLYEVGRPD---------------RFLQKMEPYLKMIADKEDREEKVGMIDPR 197
Query: 647 KLLPTKTAYWTYPGSLTPPPCPE 715
+ Y+ Y GSLT PPC +
Sbjct: 198 GARGRASVYYRYMGSLTTPPCTQ 220
>08_02_0714 +
20343864-20344385,20344928-20345098,20345933-20345986,
20346300-20346386
Length = 277
Score = 61.7 bits (143), Expect = 6e-10
Identities = 61/213 (28%), Positives = 87/213 (40%), Gaps = 9/213 (4%)
Frame = +2
Query: 104 DNEWGYT--CENGPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNH 265
D+++GY GP W P+ + G QSP+++ + L L + Y N
Sbjct: 29 DDQFGYIPGTPRGPENWGSLKPEWATCSSGEMQSPINLGLLDLTLAPGLGDLNYTYR-NA 87
Query: 266 PRSIVNPGYCWRVDENGYDSELKGGPL--NNDVYKLQQWHCHWGALNGEGSEHTVDGRSF 439
++VN G+ V +G D G L N Y+L+Q HW A SEH VDGR +
Sbjct: 88 NATVVNRGHDIMVRFDGGDDAAAAGGLVINGTAYRLRQ--VHWHA----PSEHAVDGRRY 141
Query: 440 SGELHLVHWNTSKYHSFGEAAGKPDXXXXXXXXXXXXSKHRELDKVVQLLPFVQHKGDKV 619
ELH+VH NT + ++ L K+ + V + DK
Sbjct: 142 DMELHMVHLNTQ------------NQTAVVGILYAIGAQDEFLHKLEPYIIEVADQKDKE 189
Query: 620 TFCE-PLDPAKLLPTKTAYWTYPGSLTPPPCPE 715
+DP Y+ Y GSLT PPC E
Sbjct: 190 KIVNGGVDPNVAKEHDIVYYRYMGSLTTPPCTE 222
>08_02_0970 -
23140109-23140192,23140604-23140657,23140783-23140794,
23140842-23141009,23141371-23141473,23141574-23141680,
23143766-23143977,23144136-23144223
Length = 275
Score = 61.3 bits (142), Expect = 8e-10
Identities = 66/216 (30%), Positives = 90/216 (41%), Gaps = 12/216 (5%)
Frame = +2
Query: 104 DNEWGYT--CENGPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNH 265
+ ++GY ENGP W P+ G QSP+D+ R+ +L L + Y +
Sbjct: 32 ERKFGYVPGTENGPGNWSRLDPRWAKCNTGNMQSPIDLSHERLMR--NLGYLDYSY-LPA 88
Query: 266 PRSIVNPGYCWRVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSG 445
S+VN G+ V G + +N YKL+Q H H SEHTV+GR +
Sbjct: 89 EASMVNRGHDIEVKFMGNAGRVV---INGKAYKLKQLHWH------TPSEHTVNGRRYDM 139
Query: 446 ELHLVHWN-TSKYHSFGE--AAGKPDXXXXXXXXXXXXSKHRELDKVVQLLPFVQHKGDK 616
ELHLVH + S G G PD ++ L PF++ D
Sbjct: 140 ELHLVHDDGNSNTAVIGNLYQIGNPDPF------------------LLMLEPFIRRIADT 181
Query: 617 VTFCEPL---DPAKLLPTKTAYWTYPGSLTPPPCPE 715
EP+ DP Y+ Y GSLT PPC E
Sbjct: 182 KDKSEPIGVVDPQLAKSPDAVYYRYMGSLTTPPCTE 217
>08_02_0710 +
20275834-20276352,20276970-20277140,20277692-20277745,
20277848-20277934
Length = 276
Score = 60.1 bits (139), Expect = 2e-09
Identities = 56/199 (28%), Positives = 82/199 (41%), Gaps = 5/199 (2%)
Frame = +2
Query: 134 GPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSIVNPGYCWR 301
GP W P+ + G QSP+++ + L L + Y N S+VN G+
Sbjct: 45 GPQNWGSLKPEWATCSSGKMQSPINLGLLDLTLAPGLGNLNYTYQ-NANASVVNRGHDIM 103
Query: 302 VDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHLVHWNTSKY 481
V +G LK +N Y+L+Q H H SEHT+DGR + ELH+VH N
Sbjct: 104 VRFDGDAGSLK---INGTAYQLRQMHWH------TPSEHTIDGRRYDMELHMVHLNAQ-- 152
Query: 482 HSFGEAAGKPDXXXXXXXXXXXXSKHRELDKV-VQLLPFVQHKGDKVTFCEPLDPAKLLP 658
+AA ++ L K+ ++ + +G + DP
Sbjct: 153 ---NQAA-------VIGILYTIGTRDEFLQKLEPYIIEISKQEGKERVIIGGADPNVAKG 202
Query: 659 TKTAYWTYPGSLTPPPCPE 715
T Y+ Y GS T PPC E
Sbjct: 203 QDTVYYRYMGSFTTPPCTE 221
>09_04_0371 -
17020539-17020607,17020697-17020747,17020888-17021058,
17023296-17023404,17023570-17023676,17024429-17024640,
17024805-17024952
Length = 288
Score = 58.4 bits (135), Expect = 5e-09
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 10/235 (4%)
Frame = +2
Query: 41 FTSKDTDTRVVVSDISKVIMADNEWGYTCE-NGPATWIEKFPQ----ARGTRQSPVDIVT 205
F+S T TR +D + M+ +GY + GPA W + G +QSP+DI T
Sbjct: 35 FSSAITPTR---ADHVEGHMSHEMFGYENDATGPAKWGSLHKEWAVCGDGKKQSPIDITT 91
Query: 206 SRVKSGASLPPLKWRYSVNHPRSIVNPGYCWRVDENGYDSELKGGPLNNDVYKLQQWHCH 385
V+ PL Y +I N G+ + + +S+L + Y L+Q H H
Sbjct: 92 --VEPQKVKEPLMQAYKAG-ATTIQNRGHDYMLKWKDGNSKLT---VQGKEYTLKQVHWH 145
Query: 386 WGALNGEGSEHTVDGRSFSGELHLVHWNTSKYHS-----FGEAAGKPDXXXXXXXXXXXX 550
E SEHT++G F E+H+VH + S + AG+P+
Sbjct: 146 ------EPSEHTINGTRFDAEMHMVHEDPSMARAVVSVLLSTKAGQPNAVL--------- 190
Query: 551 SKHRELDKVVQLLPFVQHKGDKVTFCEPLDPAKLLPTKTAYWTYPGSLTPPPCPE 715
E+ + L + ++V EP+DP+ + + Y+ Y GSLT PPC E
Sbjct: 191 ---TEMAPHFKNLAGKEKAEEEVK--EPVDPSTWVDKTSGYYRYDGSLTTPPCTE 240
>08_02_0711 +
20305341-20305859,20306278-20306448,20306995-20307048,
20307389-20307475
Length = 276
Score = 58.4 bits (135), Expect = 5e-09
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 5/199 (2%)
Frame = +2
Query: 134 GPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSIVNPGYCWR 301
GP W P+ + G QSP+++ + L L + Y N S+VN G+
Sbjct: 44 GPQNWGSLKPEWATCSSGKMQSPINLGLLDLTLAPGLGNLNYTYK-NANASVVNRGHDIM 102
Query: 302 VDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHLVHWNTSKY 481
V +G LK +N Y+L+Q H H SEHT+DGR + ELH+VH N
Sbjct: 103 VRFDGDAGSLK---INGTAYQLRQMHWH------TPSEHTIDGRRYDMELHMVHLNAQ-- 151
Query: 482 HSFGEAAGKPDXXXXXXXXXXXXSKHRELDKV-VQLLPFVQHKGDKVTFCEPLDPAKLLP 658
+AA + L K+ ++ +G + DP
Sbjct: 152 ---NQAA------VIGILYTIGTTPDEFLQKMEPYIIAISNQEGKEKMVVGGADPNVAKG 202
Query: 659 TKTAYWTYPGSLTPPPCPE 715
T Y+ Y GS T PPC E
Sbjct: 203 KDTVYYRYMGSFTTPPCTE 221
>02_04_0092 +
19655747-19655825,19656362-19656567,19656990-19657096,
19657189-19657291,19657699-19657881,19657972-19658094
Length = 266
Score = 55.6 bits (128), Expect = 4e-08
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Frame = +2
Query: 101 ADNEWGYTCENGPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHP 268
+D +GY+ GP W P ++GT QSP++I+ L PL+ Y+ +
Sbjct: 26 SDVVFGYSGSTGPEHWGSLSPNFTTCSKGTYQSPINILKDDAVYNPKLEPLEMDYTAANT 85
Query: 269 RSIVNPGYCWRVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGE 448
+IV+ + + N +K ++ YKL+Q H H SEHT++G+ F+ E
Sbjct: 86 -TIVDNVFNIALRYNDTAGTVK---VDGKKYKLRQLHWH------SPSEHTINGQRFAVE 135
Query: 449 LHLVHWNTSKYHSFGEAA---GKPDXXXXXXXXXXXXSKHRELDKVVQLLPFVQHKGDKV 619
LH+VH + + GKPD L ++ L + +G K
Sbjct: 136 LHMVHHSDDGNITVIAVLYRHGKPDPF---------------LFQIKDKLAALYLEGCKA 180
Query: 620 TFCEPL-----DPAKLLPTKTAYWTYPGSLTPPPCPES 718
EPL D +L Y+ Y GSLT PPC E+
Sbjct: 181 EKGEPLPVGLVDMRELKKGADRYFRYVGSLTTPPCTEN 218
>04_03_0863 +
20397161-20397239,20397464-20397672,20397768-20397874,
20397996-20398098,20398236-20398412,20398549-20398704
Length = 276
Score = 49.6 bits (113), Expect = 3e-06
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 12/215 (5%)
Frame = +2
Query: 110 EWGYTCENGPATW---IEKFPQ-ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSI 277
++GYT GP W F + + G +QSP+DI T+ + ++ PL Y+ + +
Sbjct: 30 KFGYTGSIGPDFWGNLSADFTRCSNGKQQSPIDIDTNNLVHELNMEPLHRNYTAANATLV 89
Query: 278 VNPGYCWRVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHL 457
N + V Y+ +N Y L+Q H H SEHT++G F ELH+
Sbjct: 90 DN---IFNVALR-YEEAAGVLSINGVKYTLKQMHWH------SPSEHTINGFRFPLELHM 139
Query: 458 VHWNTS---KYHSFGEAAGKPDXXXXXXXXXXXXSKHRELDKVVQLLP--FVQHKGDKVT 622
VH N + +F G+PD E DK+ L KG V
Sbjct: 140 VHTNENGNITVLAFLYRFGRPDPFF-------------EQDKLAALNAEGCKAEKGSPV- 185
Query: 623 FCEPLDPAKLLPTKT---AYWTYPGSLTPPPCPES 718
P LL + Y+ Y GSLT PPC E+
Sbjct: 186 ---PAGSVSLLTMRQHVHIYYRYVGSLTTPPCAEN 217
>12_01_0343 +
2640822-2641106,2641488-2641556,2641708-2641887,
2642015-2642081,2643237-2644015
Length = 459
Score = 47.2 bits (107), Expect = 1e-05
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = +2
Query: 131 NGPATWIEKFPQAR----GTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSIVNPGYCW 298
+GP+ W + P+ R G QSP+DI T V + L L Y+ + +IVN G
Sbjct: 218 DGPSNWGKLSPEYRMCGEGRSQSPIDINTKTVVPRSDLDTLDRNYNAVNA-TIVNNGKDI 276
Query: 299 RVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHLVH 463
+ +G E+ + Y+ Q HW A SEHT++GR F ELHLVH
Sbjct: 277 TMKFHG---EVGQVIIAGKPYRFQA--IHWHA----PSEHTINGRRFPLELHLVH 322
>02_05_0490 +
29456825-29457499,29458771-29459057,29460922-29461039,
29461451-29461972,29462058-29462170,29463033-29463053,
29463726-29463960,29464218-29464381,29464695-29464776,
29465077-29465166,29465625-29465858,29466347-29466418,
29466857-29467000,29467573-29467659,29467940-29468098,
29469216-29469476,29469789-29469836
Length = 1103
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +2
Query: 632 PLDPAKLLPTKTAYWTYPGSLTPPPCPESGDLAS 733
PLDPA + P+ T PGS T P PE D AS
Sbjct: 35 PLDPALIFPSATP--AQPGSATIPAFPEQSDAAS 66
>11_01_0329 + 2471015-2471075,2471152-2471432
Length = 113
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +2
Query: 110 EWGYTCEN--GPATWIEKFPQAR----GTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPR 271
++GY + GP W + P + G +QSP+DIVT + S +L L Y+ +
Sbjct: 40 DYGYAAGSKLGPENWGKLSPAYKLCGDGKKQSPIDIVTKQAISNPNLDSLNRTYTAS-DG 98
Query: 272 SIVNPG 289
++VN G
Sbjct: 99 TLVNNG 104
>01_01_1021 + 8061007-8061150,8061244-8061708
Length = 202
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 576 TLSSSRCFEPTINRTPKTASPSGFPAASPKLWYLLVF 466
T SSS T +P A+P PAAS KLW +L F
Sbjct: 60 TSSSSPSPATTPTPSPAAAAPKAKPAASTKLWDVLAF 96
>09_06_0352 + 22472369-22472731,22472829-22472941,22473420-22474226,
22474314-22474620,22474862-22475027,22475491-22475534,
22476019-22476161,22477900-22477937,22478032-22478129,
22478130-22478220,22478514-22478693,22479311-22479495,
22479583-22479678,22480151-22480297,22480763-22480864,
22480932-22481564
Length = 1170
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 44 TSKDTDTRVVVSDISKVIMADNEW--GYTCENGPATWIEK 157
T+K+T + VS ISK++ A++ W G N A+WI K
Sbjct: 911 TNKETVAELFVSLISKLLSAESLWEHGLCASNFEASWISK 950
>10_06_0035 -
9896289-9896390,9897394-9897503,9897587-9897715,
9898734-9898800,9898888-9898970,9899878-9899959,
9900049-9900125,9900206-9900289,9900368-9900437,
9900580-9900668,9900921-9901613,9902833-9903142
Length = 631
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 596 VQHKGDKVTFCEPLDPAKLLPTKTAYW--TYPGSLTPPPCPESGD 724
VQ KGD + CEP P K L W T G T C ESG+
Sbjct: 457 VQFKGDGYSNCEPAGPGKCLINHGGCWHETRNGK-TFSACQESGN 500
>03_02_1016 + 13228113-13228964
Length = 283
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 373 MALPLGSAQWGGLRTYSGRSLVLRRTPPGSLEHKQVPQLRGG 498
+ LP +A W + ++VLR PP ++ H P LRGG
Sbjct: 100 LPLPAPAAPWHVMTGGPRNTMVLRPAPPPAMNHPH-PLLRGG 140
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 11 PVHSVDTRLTFTSKDTD---TRVVVSDISKVIM-ADNEWGYT 124
P+ SVD R + S D T V+ D+ KV+ DNEWGY+
Sbjct: 359 PLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYS 400
>09_02_0318 -
7191763-7191879,7192375-7192494,7192568-7192666,
7192846-7192957,7193058-7193161,7193341-7193520,
7193611-7193880,7194364-7194660,7195283-7195477
Length = 497
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +3
Query: 246 GGTLSIILVPSSILATVGVSTKTAMIQN*KVDLSTMMFTNYNNGIATGERSMGRAQNIQW 425
G +I +P S VS + Q L+ + Y N I G ++ G + +
Sbjct: 95 GANYRLIDIPVSNCLNSNVSKIYVLTQFNSASLNRHLSRAYGNNIG-GYKNEGFVEVL-- 151
Query: 426 TVARSPENSTWFTGT 470
+SPEN WF GT
Sbjct: 152 AAQQSPENPNWFQGT 166
>07_01_0562 + 4175711-4175863,4175944-4176393
Length = 200
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 549 PTINRTPKTASPSGFPAASPKLWYLLVF 466
PT +P A+P PAAS LW +L F
Sbjct: 67 PTPTPSPAAAAPRAKPAASTGLWDVLAF 94
>11_01_0808 -
7183656-7183671,7184062-7184324,7184768-7184857,
7184958-7185191
Length = 200
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/105 (23%), Positives = 41/105 (39%)
Frame = -2
Query: 684 GYVQ*AVLVGSSLAGSRGSQNVTLSPLCCTKGSNCTTLSSSRCFEPTINRTPKTASPSGF 505
GY++ + G L RG+ V L PL + ++++ + PT + S
Sbjct: 10 GYLEAILDAGVKLREQRGAAAVQLPPLLPAPEDAASAVATAATYSPTRYFVEEVVSRFD- 68
Query: 504 PAASPKLWYLLVFQ*TRWSSPENERPSTVCSEPSPLSAPQWQCHC 370
K W +V R S N R +C ++ + QCHC
Sbjct: 69 DRDLHKTWTKVVAM--RNSQERNNRLENLCWRIWNVARRKKQCHC 111
>08_02_1078 +
24179558-24179936,24180577-24180634,24180721-24180804,
24180908-24181010,24181359-24181649
Length = 304
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -2
Query: 636 RGSQNVTLSPLCCTKGSNCTTLSSSR-CFEPTI 541
R S N+TLS L ++ SN ++LSSS +EP +
Sbjct: 35 RSSSNLTLSSLSLSQNSNDSSLSSSNSSWEPKV 67
>03_03_0133 + 14727510-14727651,14727742-14728078,14728448-14728763
Length = 264
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 403 GGLR-TYSGRS---LVLRRTPPGSLEHKQVPQLRGGGRKTRWTSRFRSPINGW 549
GG+R T +G S LVL G+ + V GGGRK RW + R+ W
Sbjct: 167 GGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNW 219
>03_02_0400 -
8135283-8135490,8136047-8136213,8136289-8136477,
8136560-8136655,8136746-8136874,8136947-8137123,
8137256-8137366,8138592-8138792,8139022-8139186,
8139293-8139527,8139618-8139745,8139833-8139928,
8140017-8140112,8140252-8140325,8140393-8140462,
8140556-8140665,8140753-8140906,8141040-8141155,
8141259-8141379,8141464-8141641,8142331-8142489,
8142619-8142732,8142821-8143000,8143098-8143177
Length = 1117
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 380 CHWGALNGEGSEHTVDGRSFSGELHLVHWNTSK 478
C A + +GS G S GE HLV WN S+
Sbjct: 548 CTTMAYSADGSRLFSCGTSKDGESHLVEWNESE 580
>11_01_0800 -
7047425-7048253,7048340-7048927,7049050-7049268,
7049398-7049518,7050593-7050983
Length = 715
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 430 SLVLRRTPPGSLEHKQVPQLRGGGRK-TRWTSRFRSPINGWL 552
SL+ R PG E + RGGG+K + +S FR+ + G+L
Sbjct: 31 SLLDVRAFPGQKEEGEKQPARGGGKKSSSSSSTFRAQVRGFL 72
>11_01_0330 + 2472195-2472743
Length = 182
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 668 AYWTYPGSLTPPPCPE 715
+Y+ Y GSLT PPC E
Sbjct: 112 SYFRYAGSLTAPPCTE 127
>10_02_0079 + 5016115-5016936
Length = 273
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -2
Query: 576 TLSSSRCFEPTINRTPKTASPSGFPAASPKLWYLLVFQ*TRWSSPENERP-STVCSEPSP 400
+++S P P+ A P+ PAA+P S+P N P +T C P P
Sbjct: 10 SIASGGLAAPAPPTNPRNAIPAANPAANP-------ISGAAHSAPANAPPPATECPVPPP 62
Query: 399 LSAPQW 382
P+W
Sbjct: 63 PPLPRW 68
>07_03_0722 + 20946201-20947327,20949531-20950791
Length = 795
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = -2
Query: 618 TLSPLCCTKGSNCTTLSSSRCFEPTINRTPKTASPSGFPAASPKLWYLLVFQ*TRWSSPE 439
T+ PL C C L RCF+P N + P + +P ++ W++ E
Sbjct: 102 TVVPLDC-----CNGLLLCRCFQPGPNNSDDEIEPFHYAVCNPATKEWVMLPDADWANGE 156
Query: 438 NERPSTVCSEPS 403
R + +C +P+
Sbjct: 157 T-RIACLCFDPA 167
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = -2
Query: 618 TLSPLCCTKGSNCTTLSSSRCFEPTINRTPKTASPSGFPAASPKLWYLLVFQ*TRWSSPE 439
T+ PL C C L RCF+P N + P + +P ++ W++ E
Sbjct: 520 TVVPLDC-----CNGLLLCRCFQPGPNNSDDEIEPFHYAVCNPATKEWVMLPDADWANGE 574
Query: 438 NERPSTVCSEPS 403
R + +C +P+
Sbjct: 575 T-RIACLCFDPA 585
>07_03_0497 + 18777377-18777592,18777691-18778512
Length = 345
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 163 SSTWHST-KSRRYCDFSRQKWSFPAAIEMAVLCQSSSFHRQSWLL 294
S WH T K R+Y +F ++++ + LC R+ W+L
Sbjct: 202 SQQWHLTWKHRKYEEFYEEEYASIGTWHLLELCDRLHMVRREWVL 246
>07_01_0439 + 3333654-3334217
Length = 187
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 500 PPPRSCGTCLCSSEPGGVLRRTSDRPLYVLSPP 402
PPP S G PGG++R +PL V PP
Sbjct: 9 PPPSSKG----KRRPGGIIRGPRPQPLIVSPPP 37
>06_01_0934 -
7212408-7212794,7212887-7213416,7214192-7214302,
7214322-7214811
Length = 505
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 410 SPPH*ALPSGNAIVVICKHHC*EVHLLILNH 318
+P H A+ GNAI++ C V+L I+NH
Sbjct: 326 TPLHLAVKHGNAIIISCLMMNTRVNLSIINH 356
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,396,437
Number of Sequences: 37544
Number of extensions: 601402
Number of successful extensions: 2053
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2043
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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