Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5151
         (670 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK055443-1|BAB70924.1|  135|Homo sapiens protein ( Homo sapiens ...    31   2.8  
BX537915-1|CAD97898.1|  315|Homo sapiens hypothetical protein pr...    30   6.5  
BC119002-1|AAI19003.1|  844|Homo sapiens prickle homolog 2 (Dros...    30   6.5  

>AK055443-1|BAB70924.1|  135|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30881 fis, clone FEBRA2004818, highly similar to
           DRR1 PROTEIN. ).
          Length = 135

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 20/71 (28%), Positives = 28/71 (39%)
 Frame = +1

Query: 31  RGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRTPGNRGLQCRPPSAREDQDHHP* 210
           RG     + +L R   HR R  L  +++  L     + P  + L  R     +  D HP 
Sbjct: 57  RGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFEQELLRRQQRLNQVGDGHPA 116

Query: 211 GRDSEPGLPIR 243
           G    PGL  R
Sbjct: 117 GTTHPPGLSSR 127


>BX537915-1|CAD97898.1|  315|Homo sapiens hypothetical protein
           protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +1

Query: 10  RPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRTPGNRGLQCRPP-SAR 186
           +P  +R R RRA+ R    R   HR RR+   +    LH  + R   +R L+ RPP  AR
Sbjct: 134 QPMSERTR-RRATSRDDNRRFRPHRSRRSRRSRSDNALHLASEREAISR-LKDRPPLRAR 191

Query: 187 EDQD 198
           ED D
Sbjct: 192 EDYD 195


>BC119002-1|AAI19003.1|  844|Homo sapiens prickle homolog 2
           (Drosophila) protein.
          Length = 844

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +1

Query: 10  RPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRTPGNRGLQCRPP-SAR 186
           +P  +R R RRA+ R    R   HR RR+   +    LH  + R   +R L+ RPP  AR
Sbjct: 663 QPMSERTR-RRATSRDDNRRFRPHRSRRSRRSRSDNALHLASEREAISR-LKDRPPLRAR 720

Query: 187 EDQD 198
           ED D
Sbjct: 721 EDYD 724


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,822,176
Number of Sequences: 237096
Number of extensions: 1470870
Number of successful extensions: 5593
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5588
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)