Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5144
         (591 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003530-1|AAO39534.1|  674|Drosophila melanogaster RE12147p pro...    28   8.2  
AY061004-1|AAL28552.1|  124|Drosophila melanogaster HL01958p pro...    28   8.2  
AE014298-1633|AAF48053.2|  784|Drosophila melanogaster CG32666-P...    28   8.2  
AE014298-1632|AAS65317.1|  784|Drosophila melanogaster CG32666-P...    28   8.2  

>BT003530-1|AAO39534.1|  674|Drosophila melanogaster RE12147p
           protein.
          Length = 674

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 272 KSTTKKHYTHYHLFNTHTHTHIYSFVYVA 186
           KST+  H+ H+H  + H H H +  V  A
Sbjct: 626 KSTSAAHHLHHHHMHHHHHHHHHHVVIAA 654


>AY061004-1|AAL28552.1|  124|Drosophila melanogaster HL01958p
           protein.
          Length = 124

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/43 (25%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -2

Query: 281 KYIKSTT-KKHYTHYHLFNTHTHTHIYSFVYVALAKSEIIKVY 156
           +YI+S +    Y++ +   +H + HIY+  Y+++  S ++++Y
Sbjct: 46  RYIQSPSCSLIYSNANYIVSHIYIHIYTHTYISVLVSLLLRIY 88


>AE014298-1633|AAF48053.2|  784|Drosophila melanogaster CG32666-PB,
           isoform B protein.
          Length = 784

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 272 KSTTKKHYTHYHLFNTHTHTHIYSFVYVA 186
           KST+  H+ H+H  + H H H +  V  A
Sbjct: 626 KSTSAAHHLHHHHMHHHHHHHHHHVVIAA 654


>AE014298-1632|AAS65317.1|  784|Drosophila melanogaster CG32666-PA,
           isoform A protein.
          Length = 784

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 272 KSTTKKHYTHYHLFNTHTHTHIYSFVYVA 186
           KST+  H+ H+H  + H H H +  V  A
Sbjct: 626 KSTSAAHHLHHHHMHHHHHHHHHHVVIAA 654


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,526,143
Number of Sequences: 53049
Number of extensions: 461813
Number of successful extensions: 1311
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)