Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5142
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889 48 1e-05
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 46 4e-05
04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202 45 7e-05
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 40 0.001
02_05_1332 + 35758657-35758728,35758959-35760689 36 0.042
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 34 0.13
04_03_1028 - 21827961-21827972,21828018-21828112,21828286-218283... 33 0.17
07_01_0287 - 2094333-2094542,2094719-2095999 33 0.23
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 33 0.30
01_01_1150 + 9161058-9162722,9162837-9162920,9163095-9163199,916... 32 0.39
06_03_0246 + 18672704-18673111,18674069-18674164,18674362-186745... 32 0.52
03_01_0336 - 2659349-2659486,2659607-2659758,2660257-2660365,266... 32 0.52
02_01_0213 + 1416721-1417440 31 0.69
08_01_0491 + 4290881-4291228,4291298-4291393 31 0.91
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145... 30 1.6
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 30 1.6
03_02_0797 - 11296426-11297258,11297745-11297901 30 1.6
07_01_0800 - 6276423-6276833 30 2.1
04_03_0908 + 20743436-20744018,20744128-20744168,20744320-207445... 30 2.1
03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238 30 2.1
08_01_0465 + 4099721-4100556,4101505-4103614 29 2.8
02_03_0362 + 18158975-18159337 29 2.8
07_01_0890 - 7437901-7439339,7439452-7439657,7439841-7440171,744... 29 3.7
05_05_0351 - 24319356-24319385,24319470-24320902,24321011-243211... 29 3.7
05_05_0044 - 21819193-21819418,21819531-21820759 29 3.7
01_06_1213 - 35466954-35467592 29 3.7
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 28 6.4
03_02_0823 - 11538677-11539324 28 6.4
04_01_0377 - 4970034-4970687 28 8.5
03_05_0517 - 25118232-25118730,25119002-25119273 28 8.5
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 28 8.5
>05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889
Length = 493
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Frame = +2
Query: 131 DCYFYYYS--TCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHMELRKNRK-- 298
DC ++ S TCTKG C +RH A C W +G C + C RH L K
Sbjct: 19 DCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCVNPSCTFRHPPLENLNKTK 78
Query: 299 ---------------QIPCYWENQPGGCRKIHCPFMHKNPEARTDGIAPSQPAPPVHACL 433
PCY+ + +CP++H+ P D + S A + +
Sbjct: 79 SLADPLSLCSTSVKAANPCYFYYNSHCSKGDNCPYLHE-PLTSNDAVGTSCKATTSNPAV 137
Query: 434 NESVV 448
++S V
Sbjct: 138 SKSYV 142
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2
Query: 113 SPRKFNDCYFYYYSTCTKGDNCVFRHEP 196
S + N CYFYY S C+KGDNC + HEP
Sbjct: 90 SVKAANPCYFYYNSHCSKGDNCPYLHEP 117
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +2
Query: 89 RIAKNTMESPRKFNDCYFYYYSTCTKGDNCVFRHEPSALGCETMCTAWQQGKC-TDKRCK 265
R+ + P+ C+FY + C +G+ C F H+ + L CT + +G C C
Sbjct: 420 RLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCP 479
Query: 266 LRHMELRKNRKQIPCYWENQPGGC-RKIHCPFMHKNPEA 379
H EL K PC+ + G C R C F H P A
Sbjct: 480 YDH-ELSK----YPCHNFMENGMCIRGDKCKFSHVIPTA 513
>04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202
Length = 711
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 110 ESPRKFNDCYFYYYS--TCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRH 274
E+ R+ DC ++ S TC KG+ C FRH +A C W C + +C RH
Sbjct: 29 EALRRNTDCVYFLASPLTCKKGNECDFRHSDNARMNPRDCWYWLNSNCLNPKCPFRH 85
Score = 35.5 bits (78), Expect = 0.042
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 113 SPRKFNDCYFYYYSTCTKGDNCVFRHEPSALG 208
S ++ CY++ C KGD C F H P ++G
Sbjct: 111 SGKQLVPCYYFKKGNCLKGDRCAFYHGPQSVG 142
>06_03_0867 + 25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Frame = +2
Query: 59 LISVLKFARVRIAKNTMES--PRKFNDCYFYY-YSTCTKG-DNCVFRHEPSALGCETMCT 226
+I +L +VR + +T+ S +K C F+ + C K C + H+ + + T+CT
Sbjct: 1808 VIRMLASDKVRWSLHTVRSRLAKKQQYCQFFTRFGECKKPRGKCPYIHDRAKV---TICT 1864
Query: 227 AWQQGKCTDKRCKLRHMELRKNRKQIPCYWENQPGGCRKIHCPFMH 364
+ +G C++ CKL H L + + G C I CP+ H
Sbjct: 1865 KFLKGLCSNTSCKLTHKVLPERMPDCSYFLR---GLCTNIACPYRH 1907
>02_05_1332 + 35758657-35758728,35758959-35760689
Length = 600
Score = 35.5 bits (78), Expect = 0.042
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 134 CYFYYYSTCTKGDNCVFRHEPSALG 208
CY++ C KGD C F H P A G
Sbjct: 68 CYYFQKGMCVKGDRCAFLHLPQATG 92
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = +2
Query: 134 CYFYYYSTCTKGDNCVFRHEPSAL--GCETMCTAWQQGKCTDKRCKLRHMELRKNRKQIP 307
C+ + C++G NC + H+ S G G+ E R+ K P
Sbjct: 320 CHDFVKGRCSRGANCRYVHDDSTPHGGWRDEVRDNAIGRSGPDSSYGNRTEHRRTNKN-P 378
Query: 308 C-YWENQPGGCRK-IHCPFMHKNPEARTDGI-APSQP 409
C ++ N GGCR+ +CP++H+ G+ AP +P
Sbjct: 379 CKFFAN--GGCRRGQNCPYLHEEASQSQMGLGAPDEP 413
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 128 NDCYFYYYSTCTKGDNCVFRHEPSA 202
N C F+ C +G NC + HE ++
Sbjct: 377 NPCKFFANGGCRRGQNCPYLHEEAS 401
>04_03_1028 -
21827961-21827972,21828018-21828112,21828286-21828361,
21828921-21829037,21829532-21829621,21830011-21830056,
21831407-21831502,21831599-21832008
Length = 313
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 107 MESPRKFNDCYFYYYSTCTKGDN-CVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHM 277
+E P+ C + C++ N C F H C +C + +G+C K C+ H+
Sbjct: 177 VEDPKVKMVCRDFTRGRCSRSANECRFLHHSPLEDCAIVCQDFLRGRCDRKSCRYSHV 234
>07_01_0287 - 2094333-2094542,2094719-2095999
Length = 496
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 80 ARVRIAKNTMESPRKFNDCYFYYYSTCTKGDNCVFRH 190
A R A +E +K YF+ TC +GD C FRH
Sbjct: 458 ANCRFAHGEVELGKKEPCWYFFSGQTCPRGDTCGFRH 494
>10_08_0198 +
15688142-15690427,15690524-15690607,15691232-15691336,
15691420-15691528,15693037-15693188,15693278-15693583
Length = 1013
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -1
Query: 704 EDINFYPNTISVGRGLSTCNFSRDAYL 624
ED N P +++G+GLS+ NF ++AY+
Sbjct: 889 EDHNIRPGWLTLGKGLSSSNFHKEAYI 915
>01_01_1150 +
9161058-9162722,9162837-9162920,9163095-9163199,
9163310-9163418,9163956-9164107,9164210-9164356
Length = 753
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -1
Query: 704 EDINFYPNTISVGRGLSTCNFSRDAYL 624
ED N P +++G+GLS NF+++AY+
Sbjct: 682 EDHNIRPGWLTLGKGLSYSNFNKEAYI 708
>06_03_0246 +
18672704-18673111,18674069-18674164,18674362-18674571,
18675780-18675851,18675898-18675945
Length = 277
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Frame = +2
Query: 128 NDCYFYY-YSTCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHMELRKNRKQI 304
+DC Y + C G NC F H P L + + W+ C K ++ N +
Sbjct: 105 HDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGL 164
Query: 305 P-------CYWENQPGGCR-KIHCPFMHKN 370
P C + G C+ +C F H N
Sbjct: 165 PLRPGTGLCSYYMNRGICKFGSNCKFHHPN 194
>03_01_0336 -
2659349-2659486,2659607-2659758,2660257-2660365,
2660459-2660563,2660874-2660957,2661072-2662745
Length = 753
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -1
Query: 704 EDINFYPNTISVGRGLSTCNFSRDAYL 624
ED N P +++G+GLS NF+++AY+
Sbjct: 685 EDHNIRPGWLTLGKGLSYSNFNKEAYV 711
>02_01_0213 + 1416721-1417440
Length = 239
Score = 31.5 bits (68), Expect = 0.69
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +1
Query: 418 CSCLPKRECGGAATDGSHPAPCCARPGAASVAATKTSGAG 537
C+ + K CGGAATDG PA A GA + AA GAG
Sbjct: 49 CTKMCKEACGGAATDGHAPA-AGAGAGAGAGAAV---GAG 84
>08_01_0491 + 4290881-4291228,4291298-4291393
Length = 147
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 442 CGGAATDGSHPAPCCARPGAASVAATKTSGA 534
CGG D S P P RP A+ A T T+ A
Sbjct: 63 CGGGGGDPSDPPPLRPRPHGATAAVTDTTSA 93
>07_01_1143 -
10711023-10711884,10713603-10713826,10714253-10714522,
10715071-10715175
Length = 486
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 134 CYFYYYSTCTKGDNCVFRHEPSALG 208
C FY CT+G C +RHE G
Sbjct: 163 CSFYVRGECTRGAECPYRHEMPETG 187
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 134 CYFYYYSTCTKGDNCVFRHEPSALG 208
C FY CT+G C +RHE G
Sbjct: 163 CSFYVRGECTRGAECPYRHEMPETG 187
>03_02_0797 - 11296426-11297258,11297745-11297901
Length = 329
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +1
Query: 412 PTCSCLPKRECG--GAATDGSHPAPCCARPGAASVAATKTSGAG 537
P SC P C G A G PAP + A S + + SGAG
Sbjct: 191 PDASCWPAEYCAAAGGAQSGGTPAPELSSTTAGSSSLSTDSGAG 234
>07_01_0800 - 6276423-6276833
Length = 136
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 412 PTCSCLPKRECGGAATDGSHPAPCCARPGA 501
P C L KR+C G A D CC + A
Sbjct: 28 PRCRALAKRQCAGGAVDEQVRQDCCRQLAA 57
>04_03_0908 +
20743436-20744018,20744128-20744168,20744320-20744588,
20744793-20744832
Length = 310
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +1
Query: 388 WNCSKSACPTCS----CLPKRECGGAATDGSHPAPCCARP 495
W ++S CPTC P++ G + ++GS P ARP
Sbjct: 147 WLLARSTCPTCRQSLFGAPQKASGCSESEGSQAEPAPARP 186
>03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238
Length = 697
Score = 29.9 bits (64), Expect = 2.1
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Frame = +2
Query: 107 MESPRKFNDCYFYYYSTCTKGDNCVF--RHEPSALG-CETMCTAWQQGKCTDKRCKLR-H 274
+ES D Y+++ +G + + + +P LG E T G D +LR H
Sbjct: 572 VESEHALRDTYYFFEEFQAEGLHGIAGEKWDPVMLGGAENGDTISVYGNGADMETELRCH 631
Query: 275 MELRKNRKQIPCYWENQPGGCRKIHCPFMHKNPEARTDGIAPSQPAPPVHACL 433
L + C ++ G R I C R GIA S+P PP+ C+
Sbjct: 632 GGLDLWEVRCVCGAQDDDGE-RMIACDACDVWHHTRCVGIADSEPVPPLFLCV 683
>08_01_0465 + 4099721-4100556,4101505-4103614
Length = 981
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 102 IPWSLHVNSTIVTFITIPHVQREIIVCFAMSRQP*AVKQCAQP 230
I W ++V T FI+ H++R +VC SR P + A P
Sbjct: 772 ILWGMNVTWTRTGFISPWHLRRLCLVCIEFSRLPAWINSSALP 814
>02_03_0362 + 18158975-18159337
Length = 120
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +1
Query: 388 WNCSKSACPTCSC---LPKRECGGAATDGSHPAPCCAR 492
W+ S C TC+ +P R CGG+ T PA AR
Sbjct: 62 WSDGDSGCRTCAGSGRMPCRSCGGSGTGRPLPARLIAR 99
>07_01_0890 -
7437901-7439339,7439452-7439657,7439841-7440171,
7440268-7440405,7440619-7440874,7440963-7441318,
7441421-7441709
Length = 1004
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = +1
Query: 394 CSKSACPTCSCLPKRECGGAATDGSHPAPCCARPGAASVAATKTSGAG*HVAGC 555
C S PT + + + CGG P A+V A SG G GC
Sbjct: 829 CGASKKPTATVVVAKCCGGGGGGEGTRCGASKNPATAAVVAKCCSGGGGEGIGC 882
>05_05_0351 -
24319356-24319385,24319470-24320902,24321011-24321180,
24321302-24321485,24323094-24323264,24324002-24324125
Length = 703
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +2
Query: 107 MESPRKFNDCYFYYYSTCTKGDNCVFRHEPSALGCE 214
M++ + C FY C G +C F HE G +
Sbjct: 173 MKNKTRKRTCTFYAQGRCKNGKSCTFLHEGEVSGSD 208
>05_05_0044 - 21819193-21819418,21819531-21820759
Length = 484
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 377 ARTDGIAPSQPAPPVHACLNESVVEQ 454
AR G+AP QPAPP +V EQ
Sbjct: 301 ARLSGVAPQQPAPPAGTGAGMAVDEQ 326
>01_06_1213 - 35466954-35467592
Length = 212
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 503 AAPGRAQQGAGWLPSVAAPPH--SRLGKHEQVGQADLEQFHQYV 378
+ PG + AG P+VAA P ++L ++E + D F QY+
Sbjct: 4 SGPGPSSAAAGGAPAVAAAPQPPAQLSRYESQKRRDWNTFLQYL 47
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 566 RDAAHPATCYPAPLVFVAATEAAPGRAQQGA 474
R AA PA + AP+ VA+ AAP A + A
Sbjct: 372 RPAASPAAPHVAPIAAVASAPAAPAAAARAA 402
>03_02_0823 - 11538677-11539324
Length = 215
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 560 AAHPATCYPAPLVFVAATEAAPGRAQQ 480
AAH ATC P PL AA AA +Q
Sbjct: 170 AAHVATCVPHPLHAAAAAAAAVAAPEQ 196
>04_01_0377 - 4970034-4970687
Length = 217
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/51 (25%), Positives = 19/51 (37%)
Frame = +1
Query: 403 SACPTCSCLPKRECGGAATDGSHPAPCCARPGAASVAATKTSGAG*HVAGC 555
+ C + +C P++ CG A P C G G+G GC
Sbjct: 137 NGCQSGACCPEKRCGKQAGGDKCPNNFCCSAGGYCGLGGNYCGSGCQSGGC 187
>03_05_0517 - 25118232-25118730,25119002-25119273
Length = 256
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 601 VHGQRRERSASVVTRHTQQRAIQHHLSLLL 512
+H QRRERSA +R T+++ L LLL
Sbjct: 189 LHHQRRERSAGASSRATERKEEMGGLPLLL 218
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 134 CYFYYYSTCTKGDNCVFRHEPSA 202
C F+ +C +GD C F H A
Sbjct: 986 CVFFLNGSCNRGDTCHFSHSSRA 1008
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,009,167
Number of Sequences: 37544
Number of extensions: 480575
Number of successful extensions: 1717
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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