Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5142
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26549-1|AAA67954.1|  296|Drosophila melanogaster zinc finger pr...    43   5e-04
BT029412-1|ABK57069.1|  320|Drosophila melanogaster IP02511p pro...    43   5e-04
BT025009-1|ABE01239.1|  296|Drosophila melanogaster IP02509p pro...    43   5e-04
AE014134-157|AAF51453.1|  296|Drosophila melanogaster CG3642-PA ...    43   5e-04
BT010061-1|AAQ22530.1|  597|Drosophila melanogaster LD15332p pro...    34   0.17 
AE014296-1464|AAF50410.2|  597|Drosophila melanogaster CG6694-PA...    34   0.17 
AY113336-1|AAM29341.1|  404|Drosophila melanogaster AT31705p pro...    33   0.39 
AY060945-1|AAL28493.1|  404|Drosophila melanogaster GM08440p pro...    33   0.39 
AE013599-679|AAF59063.1|  404|Drosophila melanogaster CG8635-PA ...    33   0.39 
M57889-1|AAA28920.1| 1322|Drosophila melanogaster su(s) protein ...    31   2.1  
AY071563-1|AAL49185.1| 1220|Drosophila melanogaster RE63043p pro...    31   2.1  
AL031581-8|CAA20886.1| 1325|Drosophila melanogaster EG:115C2.3,F...    31   2.1  
AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB...    31   2.1  
AE014298-82|AAF45534.1| 1325|Drosophila melanogaster CG6222-PA p...    31   2.1  
AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein ...    29   8.3  
AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-P...    29   8.3  

>U26549-1|AAA67954.1|  296|Drosophila melanogaster zinc finger
           protein protein.
          Length = 296

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +2

Query: 158 CTKGDNCVFRHEPSALGCETM-CTAWQQGKCTD-KRCKLRHMELRKNRKQIPCYWENQPG 331
           C KG  C FRH     G  T+ C  W +G C    +C+  H       K   CY+ ++  
Sbjct: 51  CDKGSACPFRH---IRGDRTIVCKHWLRGLCKKGDQCEFLHEY--DMTKMPECYFYSRFN 105

Query: 332 GCRKIHCPFMHKNPEAR 382
            C    CPF+H +P+++
Sbjct: 106 ACHNKECPFLHIDPQSK 122



 Score = 37.1 bits (82), Expect = 0.024
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
 Frame = +2

Query: 134 CYFYYYSTCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHMELRKNRKQIPCY 313
           C  +    C KGD C F HE             +   C +K C   H++ +   K  P Y
Sbjct: 70  CKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWY 129

Query: 314 WENQPGGCRK-IHCPFMHKNPEARTDGIAPSQPAPP 418
              + G CR   HC   H       D +A   P  P
Sbjct: 130 ---KRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEAP 162


>BT029412-1|ABK57069.1|  320|Drosophila melanogaster IP02511p
           protein.
          Length = 320

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +2

Query: 158 CTKGDNCVFRHEPSALGCETM-CTAWQQGKCTD-KRCKLRHMELRKNRKQIPCYWENQPG 331
           C KG  C FRH     G  T+ C  W +G C    +C+  H       K   CY+ ++  
Sbjct: 75  CDKGSACPFRH---IRGDRTIVCKHWLRGLCKKGDQCEFLHEY--DMTKMPECYFYSRFN 129

Query: 332 GCRKIHCPFMHKNPEAR 382
            C    CPF+H +P+++
Sbjct: 130 ACHNKECPFLHIDPQSK 146



 Score = 36.7 bits (81), Expect = 0.031
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
 Frame = +2

Query: 134 CYFYYYSTCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHMELRKNRKQIPCY 313
           C  +    C KGD C F HE             +   C +K C   H++ +   K  P Y
Sbjct: 94  CKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWY 153

Query: 314 WENQPGGCRK-IHCPFMHKNPEARTDGIAPSQPAPP 418
              + G CR   HC   H       D +A   P  P
Sbjct: 154 ---KRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEGP 186


>BT025009-1|ABE01239.1|  296|Drosophila melanogaster IP02509p
           protein.
          Length = 296

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +2

Query: 158 CTKGDNCVFRHEPSALGCETM-CTAWQQGKCTD-KRCKLRHMELRKNRKQIPCYWENQPG 331
           C KG  C FRH     G  T+ C  W +G C    +C+  H       K   CY+ ++  
Sbjct: 51  CDKGSACPFRH---IRGDRTIVCKHWLRGLCKKGDQCEFLHEY--DMTKMPECYFYSRFN 105

Query: 332 GCRKIHCPFMHKNPEAR 382
            C    CPF+H +P+++
Sbjct: 106 ACHNKECPFLHIDPQSK 122



 Score = 36.7 bits (81), Expect = 0.031
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
 Frame = +2

Query: 134 CYFYYYSTCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHMELRKNRKQIPCY 313
           C  +    C KGD C F HE             +   C +K C   H++ +   K  P Y
Sbjct: 70  CKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWY 129

Query: 314 WENQPGGCRK-IHCPFMHKNPEARTDGIAPSQPAPP 418
              + G CR   HC   H       D +A   P  P
Sbjct: 130 ---KRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEGP 162


>AE014134-157|AAF51453.1|  296|Drosophila melanogaster CG3642-PA
           protein.
          Length = 296

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +2

Query: 158 CTKGDNCVFRHEPSALGCETM-CTAWQQGKCTD-KRCKLRHMELRKNRKQIPCYWENQPG 331
           C KG  C FRH     G  T+ C  W +G C    +C+  H       K   CY+ ++  
Sbjct: 51  CDKGSACPFRH---IRGDRTIVCKHWLRGLCKKGDQCEFLHEY--DMTKMPECYFYSRFN 105

Query: 332 GCRKIHCPFMHKNPEAR 382
            C    CPF+H +P+++
Sbjct: 106 ACHNKECPFLHIDPQSK 122



 Score = 36.7 bits (81), Expect = 0.031
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
 Frame = +2

Query: 134 CYFYYYSTCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLRHMELRKNRKQIPCY 313
           C  +    C KGD C F HE             +   C +K C   H++ +   K  P Y
Sbjct: 70  CKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWY 129

Query: 314 WENQPGGCRK-IHCPFMHKNPEARTDGIAPSQPAPP 418
              + G CR   HC   H       D +A   P  P
Sbjct: 130 ---KRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEGP 162


>BT010061-1|AAQ22530.1|  597|Drosophila melanogaster LD15332p
           protein.
          Length = 597

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +2

Query: 218 MCTAWQQGKCTDKRCKLRHMELRKNRKQIPCYWENQPGGCRKIHCPFMHKNPEARTD 388
           +C ++ +G+CT  +C L H       +++P       G C +  CP++HK   ++T+
Sbjct: 402 ICVSFLRGECTKPKCLLSH---NVTLEKMPVCRYYLRGVCVREDCPYLHKKLSSKTE 455


>AE014296-1464|AAF50410.2|  597|Drosophila melanogaster CG6694-PA
           protein.
          Length = 597

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +2

Query: 218 MCTAWQQGKCTDKRCKLRHMELRKNRKQIPCYWENQPGGCRKIHCPFMHKNPEARTD 388
           +C ++ +G+CT  +C L H       +++P       G C +  CP++HK   ++T+
Sbjct: 402 ICVSFLRGECTKPKCLLSH---NVTLEKMPVCRYYLRGVCVREDCPYLHKKLSSKTE 455


>AY113336-1|AAM29341.1|  404|Drosophila melanogaster AT31705p
           protein.
          Length = 404

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 134 CYFYYYSTCTKGDNCVFRHEPS 199
           C F+   TCTKGD C F H+ S
Sbjct: 100 CAFFKQGTCTKGDKCKFSHDLS 121


>AY060945-1|AAL28493.1|  404|Drosophila melanogaster GM08440p
           protein.
          Length = 404

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 134 CYFYYYSTCTKGDNCVFRHEPS 199
           C F+   TCTKGD C F H+ S
Sbjct: 100 CAFFKQGTCTKGDKCKFSHDLS 121


>AE013599-679|AAF59063.1|  404|Drosophila melanogaster CG8635-PA
           protein.
          Length = 404

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 134 CYFYYYSTCTKGDNCVFRHEPS 199
           C F+   TCTKGD C F H+ S
Sbjct: 100 CAFFKQGTCTKGDKCKFSHDLS 121


>M57889-1|AAA28920.1| 1322|Drosophila melanogaster su(s) protein
           protein.
          Length = 1322

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 116 PRKFNDCYFYYYSTCTKGDNCVFRHE 193
           PRK   C FY    C K D C + H+
Sbjct: 330 PRKLELCKFYLMDCCAKRDKCSYMHK 355


>AY071563-1|AAL49185.1| 1220|Drosophila melanogaster RE63043p
           protein.
          Length = 1220

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 116 PRKFNDCYFYYYSTCTKGDNCVFRHE 193
           PRK   C FY    C K D C + H+
Sbjct: 330 PRKLELCKFYLMDCCAKRDKCSYMHK 355


>AL031581-8|CAA20886.1| 1325|Drosophila melanogaster
           EG:115C2.3,FBgn0003575;su(s) protein.
          Length = 1325

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 116 PRKFNDCYFYYYSTCTKGDNCVFRHE 193
           PRK   C FY    C K D C + H+
Sbjct: 330 PRKLELCKFYLMDCCAKRDKCSYMHK 355


>AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB,
           isoform B protein.
          Length = 511

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = -1

Query: 497 PGRAQQGAGWLPSVAA----PPHSRLGKHEQVGQADLEQFHQYVPRGSYA 360
           P RA  GAGW+P +      PP S+   H Q       Q HQ  P G+ A
Sbjct: 21  PPRAPFGAGWVPPMQQNSPYPPPSQPHPHSQPSSQMHPQQHQQYPGGAPA 70


>AE014298-82|AAF45534.1| 1325|Drosophila melanogaster CG6222-PA
           protein.
          Length = 1325

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 116 PRKFNDCYFYYYSTCTKGDNCVFRHE 193
           PRK   C FY    C K D C + H+
Sbjct: 330 PRKLELCKFYLMDCCAKRDKCSYMHK 355


>AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein
            protein.
          Length = 1871

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 21/88 (23%), Positives = 35/88 (39%)
 Frame = +2

Query: 92   IAKNTMESPRKFNDCYFYYYSTCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLR 271
            I  N  E  R   D Y       T+ D    R++  AL C+ +   ++  K   KRC+ +
Sbjct: 1746 IQSNQAEGVRDLGDTYSAAEGRQTESDQDKERYQKLALDCKILQAKYRDAKDEIKRCEKK 1805

Query: 272  HMELRKNRKQIPCYWENQPGGCRKIHCP 355
              + R   +      +N+  G R+   P
Sbjct: 1806 IKDQRLEMEGKLEKMKNKMKGSRRRRWP 1833


>AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-PC,
            isoform C protein.
          Length = 1871

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 21/88 (23%), Positives = 35/88 (39%)
 Frame = +2

Query: 92   IAKNTMESPRKFNDCYFYYYSTCTKGDNCVFRHEPSALGCETMCTAWQQGKCTDKRCKLR 271
            I  N  E  R   D Y       T+ D    R++  AL C+ +   ++  K   KRC+ +
Sbjct: 1746 IQSNQAEGVRDLGDTYSAAEGRQTESDQDKERYQKLALDCKILQAKYRDAKDEIKRCEKK 1805

Query: 272  HMELRKNRKQIPCYWENQPGGCRKIHCP 355
              + R   +      +N+  G R+   P
Sbjct: 1806 IKDQRLEMEGKLEKMKNKMKGSRRRRWP 1833


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,337,231
Number of Sequences: 53049
Number of extensions: 792288
Number of successful extensions: 2485
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2476
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)