Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5139
         (532 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030253-1|ABN49392.1|  117|Drosophila melanogaster IP18337p pro...    28   9.1  
BT030219-1|ABN49358.1|  117|Drosophila melanogaster IP18137p pro...    28   9.1  
BT030203-1|ABN49342.1|  117|Drosophila melanogaster IP18037p pro...    28   9.1  

>BT030253-1|ABN49392.1|  117|Drosophila melanogaster IP18337p
           protein.
          Length = 117

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +3

Query: 30  KRNYD*RA*LMQLMP*A*DAGISLIILDQRSFEPERVATRMYLQIRNRQ 176
           KRN+  R  L +L+       I+L    +R FEPER+  R+  + RN++
Sbjct: 34  KRNFYPRTDLRRLLQVGLIRWIALSDAQKRLFEPERILARVARRQRNKR 82


>BT030219-1|ABN49358.1|  117|Drosophila melanogaster IP18137p
           protein.
          Length = 117

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +3

Query: 30  KRNYD*RA*LMQLMP*A*DAGISLIILDQRSFEPERVATRMYLQIRNRQ 176
           KRN+  R  L +L+       I+L    +R FEPER+  R+  + RN++
Sbjct: 34  KRNFYPRTDLRRLLQVGLIRWIALSDAQKRLFEPERILARVARRQRNKR 82


>BT030203-1|ABN49342.1|  117|Drosophila melanogaster IP18037p
           protein.
          Length = 117

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +3

Query: 30  KRNYD*RA*LMQLMP*A*DAGISLIILDQRSFEPERVATRMYLQIRNRQ 176
           KRN+  R  L +L+       I+L    +R FEPER+  R+  + RN++
Sbjct: 34  KRNFYPRTDLRRLLQVGLIRWIALSDAQKRLFEPERILARVARRQRNKR 82


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,536,586
Number of Sequences: 53049
Number of extensions: 419995
Number of successful extensions: 834
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)