Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5138
         (606 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   5.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.1  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   7.1  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    21   7.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.4  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 12  GQGFAPGTPARYSTNFRPGRRKNSMCTKGR-KVGRPPACKI 131
           G    PG P+R    F  G+   +   KG+ +V R P  ++
Sbjct: 77  GLNIRPGQPSRQHAGFEFGKEYKNGFIKGQSEVQRGPGGRL 117


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 398 LVSFTNQWFVNPVGTKDIYYI 460
           L   TN  + +PV +  +YY+
Sbjct: 258 LSPMTNNLYYSPVASTSLYYV 278


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 445 FCPNWIYKPLISK 407
           FCPN + KPL  K
Sbjct: 53  FCPNVVPKPLCIK 65


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 445 FCPNWIYKPLISK 407
           FCPN + KPL  K
Sbjct: 53  FCPNVVPKPLCIK 65


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 61  GLVGEKIVCAPRGEKLDVLPRVKFYTMY 144
           G++GEK +C P+      L   K  TMY
Sbjct: 140 GILGEKQICRPKIHVFS-LHDNKLITMY 166


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 398 LVSFTNQWFVNPVGTKDIYYI 460
           L   TN  + +PV +  +YY+
Sbjct: 258 LSPMTNNLYYSPVASTSLYYV 278


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 398 LVSFTNQWFVNPVGTKDIYYI 460
           L   TN  + +PV +  +YY+
Sbjct: 258 LSPMTNNLYYSPVASTSLYYV 278


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
 Frame = -1

Query: 441 VPTGFTNH*LVKLTSLEKW-----KSILNY 367
           +  G+T   L +LT ++KW     K+I++Y
Sbjct: 261 IKAGYTIDRLYELTKIDKWFLHKMKNIIDY 290


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 159  SNKTIVHCVKFYTREDVQLFS 97
            S++TI+H +K YT   +Q+ +
Sbjct: 1138 SSETILHGLKKYTNYSMQVLA 1158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,637
Number of Sequences: 438
Number of extensions: 4209
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)