Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5137
         (354 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0227 - 28523385-28524278                                         30   0.45 
12_02_1179 - 26720533-26721021,26721329-26722597                       30   0.60 
12_01_0504 + 3999157-4000470                                           27   4.2  
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773...    27   5.6  
11_01_0128 - 1043053-1043151,1043238-1043570,1043588-1043707,104...    26   7.4  
07_01_1115 - 10297763-10298103,10298396-10298441,10299077-102991...    26   9.8  
06_01_0510 + 3681369-3681645,3682825-3682886,3683016-3683165,368...    26   9.8  

>05_07_0227 - 28523385-28524278
          Length = 297

 Score = 30.3 bits (65), Expect = 0.45
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 160 FTRSHYAWPVPFGRSYRFGIRQGRATY 80
           F+R H+ WPV  G+SY  G  +G   Y
Sbjct: 15  FSRRHFKWPV-LGKSYSHGATRGEEDY 40


>12_02_1179 - 26720533-26721021,26721329-26722597
          Length = 585

 Score = 29.9 bits (64), Expect = 0.60
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 100 ECRIGTTDRTGRAKRSANE*RGHLFLFIFVFA 195
           EC+     +TG  KR+AN     +FLF+FV A
Sbjct: 534 ECQAVNEKKTGGKKRNANRSHYPVFLFVFVVA 565


>12_01_0504 + 3999157-4000470
          Length = 437

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 38  QIWRAAVAFNVKQLVSCSPLPNAE 109
           Q+W   V    K +VSC   PN E
Sbjct: 393 QVWMITVDMRAKSVVSCKNYPNGE 416


>07_03_0797 +
           21575948-21576042,21576140-21576902,21577134-21577327,
           21577667-21577700,21578421-21578485,21579032-21579524
          Length = 547

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 141 LGPSRSVGRTDSAFGKGEQLTSCLTLNATAAR 46
           L  +  VGR+ S F KGEQ    +++N +  +
Sbjct: 376 LDKTSPVGRSKSEFAKGEQKVEAMSINPSGEK 407


>11_01_0128 -
           1043053-1043151,1043238-1043570,1043588-1043707,
           1043810-1043993,1044088-1044275,1044714-1044808,
           1044884-1045003,1045232-1045350,1052717-1052799,
           1052892-1053071
          Length = 506

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 215 RVVFNKFAKTKINRNKCPL 159
           R  F +F   K+ RNKCP+
Sbjct: 425 RTAFKRFGNQKLVRNKCPV 443


>07_01_1115 -
           10297763-10298103,10298396-10298441,10299077-10299101,
           10299663-10299718,10299818-10299925
          Length = 191

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 270 FCTSFIHLNKHLFTL*SLASCF 205
           FCT+     KH F+L  L  CF
Sbjct: 156 FCTTLFCAEKHFFSLQILCKCF 177


>06_01_0510 +
           3681369-3681645,3682825-3682886,3683016-3683165,
           3683776-3683952,3684496-3684711,3684802-3686480,
           3686602-3686667,3686753-3686822,3686909-3687547
          Length = 1111

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 93  GEQLTSCLTLNATAARQI 40
           GEQLT CL+L+ T  R++
Sbjct: 902 GEQLTECLSLSGTLYREM 919


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,043,701
Number of Sequences: 37544
Number of extensions: 134331
Number of successful extensions: 256
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)