Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5135
         (378 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein.           29   6.6  
AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein.                29   6.6  
AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant...    29   6.6  
AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein.          29   6.6  
AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein.     29   6.6  

>BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein.
          Length = 1642

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 23   TKALVTQLTIIV*SPTRCPPKPNLR*SLASGAP 121
            T  LVT  T ++ SP +  P+PNLR   A+GAP
Sbjct: 1446 TFPLVTDRTTLL-SPRKPAPRPNLRTDGATGAP 1477


>AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein.
          Length = 1712

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 23   TKALVTQLTIIV*SPTRCPPKPNLR*SLASGAP 121
            T  LVT  T ++ SP +  P+PNLR   A+GAP
Sbjct: 1516 TFPLVTDRTTLL-SPRKPAPRPNLRTDGATGAP 1547


>AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant 1
            protein.
          Length = 1434

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 23   TKALVTQLTIIV*SPTRCPPKPNLR*SLASGAP 121
            T  LVT  T ++ SP +  P+PNLR   A+GAP
Sbjct: 1238 TFPLVTDRTTLL-SPRKPAPRPNLRTDGATGAP 1269


>AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein.
          Length = 1712

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 23   TKALVTQLTIIV*SPTRCPPKPNLR*SLASGAP 121
            T  LVT  T ++ SP +  P+PNLR   A+GAP
Sbjct: 1516 TFPLVTDRTTLL-SPRKPAPRPNLRTDGATGAP 1547


>AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein.
          Length = 1658

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 23   TKALVTQLTIIV*SPTRCPPKPNLR*SLASGAP 121
            T  LVT  T ++ SP +  P+PNLR   A+GAP
Sbjct: 1462 TFPLVTDRTTLL-SPRKPAPRPNLRTDGATGAP 1493


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,096,888
Number of Sequences: 237096
Number of extensions: 1066930
Number of successful extensions: 1927
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1927
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)