Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5129
         (788 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011414-1|AAH11414.1|  505|Homo sapiens C5orf3 protein protein.       81   3e-15
AK024664-1|BAB14952.1|  505|Homo sapiens protein ( Homo sapiens ...    81   3e-15
AF159700-1|AAF76523.1|  505|Homo sapiens unknown protein.              81   3e-15
BC040452-1|AAH40452.1|  563|Homo sapiens family with sequence si...    73   2e-12
BC001096-1|AAH01096.2|  563|Homo sapiens family with sequence si...    73   2e-12

>BC011414-1|AAH11414.1|  505|Homo sapiens C5orf3 protein protein.
          Length = 505

 Score = 81.4 bits (192), Expect = 3e-15
 Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
 Frame = +1

Query: 4   AVASLAQATALSVELYHKAGEMLLV--KPRRSTADEADALTQMTAVLTKHVSELATLFTE 177
           A+ SLA+ TA S+EL+HK   ++L   K   +  + +  L+QMT VL K +S L+  FT 
Sbjct: 378 AIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKEFTT 437

Query: 178 KLNELQTENTEQIHN-YITNIFLEAGNSSTYIQNAFQLALPILQIGAV 318
            L     +    + N  IT +FLEA NS++YIQ+AFQL LP+L+I  +
Sbjct: 438 CLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVLEISLI 485


>AK024664-1|BAB14952.1|  505|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21011 fis, clone CAE04289. ).
          Length = 505

 Score = 81.4 bits (192), Expect = 3e-15
 Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
 Frame = +1

Query: 4   AVASLAQATALSVELYHKAGEMLLV--KPRRSTADEADALTQMTAVLTKHVSELATLFTE 177
           A+ SLA+ TA S+EL+HK   ++L   K   +  + +  L+QMT VL K +S L+  FT 
Sbjct: 378 AIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKEFTT 437

Query: 178 KLNELQTENTEQIHN-YITNIFLEAGNSSTYIQNAFQLALPILQIGAV 318
            L     +    + N  IT +FLEA NS++YIQ+AFQL LP+L+I  +
Sbjct: 438 CLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVLEISLI 485


>AF159700-1|AAF76523.1|  505|Homo sapiens unknown protein.
          Length = 505

 Score = 81.4 bits (192), Expect = 3e-15
 Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
 Frame = +1

Query: 4   AVASLAQATALSVELYHKAGEMLLV--KPRRSTADEADALTQMTAVLTKHVSELATLFTE 177
           A+ SLA+ TA S+EL+HK   ++L   K   +  + +  L+QMT VL K +S L+  FT 
Sbjct: 378 AIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKEFTT 437

Query: 178 KLNELQTENTEQIHN-YITNIFLEAGNSSTYIQNAFQLALPILQIGAV 318
            L     +    + N  IT +FLEA NS++YIQ+AFQL LP+L+I  +
Sbjct: 438 CLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVLEISLI 485


>BC040452-1|AAH40452.1|  563|Homo sapiens family with sequence
           similarity 114, member A1 protein.
          Length = 563

 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = +1

Query: 4   AVASLAQATALSVELYHKAGEMLL--VKPRRSTADEADALTQMTAVLTKHVSELATLFTE 177
           ++ SLA+ TA  +E  HK  E++L   +  +   D+A  L ++T  +   V+ L+  FT 
Sbjct: 447 SIESLAEVTARCIEQLHKVAELILHGQEEEKPAQDQAKVLIKLTTAMCNEVASLSKKFTN 506

Query: 178 KLNELQTENTEQIHN-YITNIFLEAGNSSTYIQNAFQLALPILQIGAV 318
            L  + +    ++ N  I+++ LE  NS+TYIQ+AFQL LP+LQ+  +
Sbjct: 507 SLTTVGSNKKAEVLNPMISSVLLEGCNSTTYIQDAFQLLLPVLQVSHI 554


>BC001096-1|AAH01096.2|  563|Homo sapiens family with sequence
           similarity 114, member A1 protein.
          Length = 563

 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = +1

Query: 4   AVASLAQATALSVELYHKAGEMLL--VKPRRSTADEADALTQMTAVLTKHVSELATLFTE 177
           ++ SLA+ TA  +E  HK  E++L   +  +   D+A  L ++T  +   V+ L+  FT 
Sbjct: 447 SIESLAEVTARCIEQLHKVAELILHGQEEEKPAQDQAKVLIKLTTAMCNEVASLSKKFTN 506

Query: 178 KLNELQTENTEQIHN-YITNIFLEAGNSSTYIQNAFQLALPILQIGAV 318
            L  + +    ++ N  I+++ LE  NS+TYIQ+AFQL LP+LQ+  +
Sbjct: 507 SLTTVGSNKKAEVLNPMISSVLLEGCNSTTYIQDAFQLLLPVLQVSHI 554


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,167,992
Number of Sequences: 237096
Number of extensions: 2083896
Number of successful extensions: 9402
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9391
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)