Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5125
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L19711-1|AAA81779.1|  895|Homo sapiens dystroglycan protein.           29   6.9  
BC014616-1|AAH14616.1|  895|Homo sapiens dystroglycan 1 (dystrop...    29   6.9  
BC012740-1|AAH12740.1|  895|Homo sapiens dystroglycan 1 (dystrop...    29   6.9  

>L19711-1|AAA81779.1|  895|Homo sapiens dystroglycan protein.
          Length = 895

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +1

Query: 61  F*IKFVDLFTYLLNNINKKIIVLVTLPFNSGERDFCNTLRL 183
           F  KFV     +LN+I+KKI ++  L F  G+R+ C+T+ L
Sbjct: 608 FKAKFVGDPALVLNDIHKKIALVKKLAFAFGDRN-CSTITL 647


>BC014616-1|AAH14616.1|  895|Homo sapiens dystroglycan 1
           (dystrophin-associated glycoprotein 1) protein.
          Length = 895

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +1

Query: 61  F*IKFVDLFTYLLNNINKKIIVLVTLPFNSGERDFCNTLRL 183
           F  KFV     +LN+I+KKI ++  L F  G+R+ C+T+ L
Sbjct: 608 FKAKFVGDPALVLNDIHKKIALVKKLAFAFGDRN-CSTITL 647


>BC012740-1|AAH12740.1|  895|Homo sapiens dystroglycan 1
           (dystrophin-associated glycoprotein 1) protein.
          Length = 895

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +1

Query: 61  F*IKFVDLFTYLLNNINKKIIVLVTLPFNSGERDFCNTLRL 183
           F  KFV     +LN+I+KKI ++  L F  G+R+ C+T+ L
Sbjct: 608 FKAKFVGDPALVLNDIHKKIALVKKLAFAFGDRN-CSTITL 647


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,147,120
Number of Sequences: 237096
Number of extensions: 1154982
Number of successful extensions: 2340
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2340
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)