Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5124
(396 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0806 - 32123513-32123905 29 1.0
05_07_0066 + 27453611-27453627,27454729-27454872,27455998-274566... 29 1.4
11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084 28 2.4
07_01_0975 + 8223269-8224354 28 2.4
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053... 28 2.4
07_01_0446 - 3371829-3372132,3374691-3375673 28 3.1
07_01_0445 - 3365244-3366227 28 3.1
03_02_0601 - 9754281-9754340,9754978-9755061,9755384-9755585,975... 28 3.1
03_06_0065 - 31399791-31399874,31399956-31400165,31400407-314005... 27 4.1
07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758 27 5.5
07_01_1212 + 11560247-11560684,11560773-11560826,11560926-115609... 27 5.5
04_04_0460 - 25378860-25379409,25379515-25379644,25380733-25380898 27 5.5
03_06_0249 + 32638112-32639140 27 5.5
03_05_0121 + 21013752-21014162,21014274-21015026,21016040-21016444 27 5.5
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 27 7.2
06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257... 27 7.2
04_01_0357 + 4667796-4667901,4668722-4668816 27 7.2
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 27 7.2
03_04_0089 - 17217235-17217461,17218298-17218418 27 7.2
02_05_0358 + 28264928-28266049 27 7.2
02_05_0214 + 26823580-26823981 26 9.6
>01_06_0806 - 32123513-32123905
Length = 130
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 262 RTGPHTYPSSVTLNSEPRCW*AQPTIQ 342
R G TYPS ++ PRCW P ++
Sbjct: 44 RHGSDTYPSLTCRDTPPRCWDMDPPVR 70
>05_07_0066 +
27453611-27453627,27454729-27454872,27455998-27456690,
27457700-27458111,27458220-27458297,27458938-27458953,
27459038-27459192
Length = 504
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +1
Query: 193 GESRRAPFAGPM------LPVAAVTRRTSRTGPHTYPSSVTLNSEPR 315
G R P AGP P AA ++RT P+ +S +L S+PR
Sbjct: 72 GGGSRKPAAGPRSSKDDDAPAAAAAADSARTSPYLAAASASLESKPR 118
>11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084
Length = 197
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 308 SEFKVTDDG*VCGPVREVRLVTAAT-GSMGPANGALLLSPSRKHFLFICVEPGSTPR 141
SE +VT DG V ++ + A G+ G G L PSR + + P PR
Sbjct: 35 SEVRVTFDGLQLKSVTDLEVAAAGDLGAEGEGGGGCSLGPSRSRWSPTTLRPDLAPR 91
>07_01_0975 + 8223269-8224354
Length = 361
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 245 TAATGSMGPANGALLLSPSRKHFLFICVEPGSTPR-CPSGTPSMSPQKGSPASQP 84
T GS G + + SPS P +P P+G+P+ P G PAS P
Sbjct: 235 TGYGGSSGSPSSSPSSSPSSSPSGSPSSSPSGSPSGSPAGSPAGGPTAGGPASGP 289
>02_05_1074 -
33904518-33904697,33904886-33904985,33905085-33905311,
33905511-33908384,33908467-33908643,33908786-33909008,
33909727-33909806,33910657-33910817,33910892-33910937,
33911129-33911251,33911730-33911804,33911920-33912120
Length = 1488
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 257 VRLVTAATGSMGPANGALLLSPSRKHFL 174
VR V A + S+GP + + L P KHFL
Sbjct: 845 VRFVVACSESIGPVDTFVYLFPHLKHFL 872
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 65 NFYSMCMAVKLEIPSVVTLMEFRLDSAEYCQAQHK 169
NF++ C+ + E+P+VV ++RL A H+
Sbjct: 101 NFHAGCLRLAAELPAVVLSFDYRLAPEHRLPAAHE 135
>07_01_0445 - 3365244-3366227
Length = 327
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 41 GCSRLPPFNFYSMCMAVKLEIPSVVTLMEFRL 136
G R P NF++ C+ + E+P+VV ++RL
Sbjct: 90 GSGRWP--NFHAWCLRLAAELPAVVLSFDYRL 119
>03_02_0601 -
9754281-9754340,9754978-9755061,9755384-9755585,
9755663-9755730,9755999-9756094,9756307-9756508,
9756590-9756661,9756786-9756826,9757016-9757089,
9757991-9758026,9758486-9758720
Length = 389
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 115 DIDGVPLGQRGVLPGSTQINRKCFREGESRRAPF 216
DIDGV L R + GS Q R+ + E + + PF
Sbjct: 52 DIDGVILRGRSPIGGSPQAIRRLYSEDGTLKIPF 85
>03_06_0065 -
31399791-31399874,31399956-31400165,31400407-31400526,
31401166-31401225,31401670-31401879,31402512-31402587,
31403010-31403173,31403254-31403316,31403640-31403727,
31403810-31404460,31405102-31405149,31405334-31405902
Length = 780
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 155 GSTPRCPSGTPSMSPQKGSPASQP 84
GS+PRC S M Q+ SP S P
Sbjct: 307 GSSPRCASPEKIMGSQERSPRSSP 330
>07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758
Length = 223
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 154 PGSTQINRKCFREGESRRAPFAGPMLPVAA-VTRRTSRTGPHTYPSSVTLNS 306
PGS+ R SRR+P A P A+ ++ + GP P+S ++S
Sbjct: 67 PGSSASPNPAPRSRSSRRSPLASPRTGTASPLSAAVAPGGPAPSPASAAVSS 118
>07_01_1212 +
11560247-11560684,11560773-11560826,11560926-11560985,
11561084-11561227
Length = 231
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 158 PGSTPRCPSGTPSMSPQKGSPASQP 84
P STP GTPS +P G+P+S P
Sbjct: 23 PSSTPAF--GTPSTNPAFGTPSSTP 45
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 158 PGSTPRCPSGTPSMSPQKGSPASQP 84
P STP GTPS +P G+P+S P
Sbjct: 50 PSSTPSF--GTPSTAPAFGTPSSTP 72
>04_04_0460 - 25378860-25379409,25379515-25379644,25380733-25380898
Length = 281
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 279 GMWTSARGASSHRRYRQHGSSEWRS 205
G WTS A RQHG W S
Sbjct: 26 GPWTSQEDALLVEHVRQHGEGRWNS 50
>03_06_0249 + 32638112-32639140
Length = 342
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 65 NFYSMCMAVKLEIPSVVTLMEFRLDSAEYCQAQH 166
NF++ C+ + E+P+VV ++RL A H
Sbjct: 97 NFHACCLRLAHELPAVVLSADYRLAPEHRLPAAH 130
>03_05_0121 + 21013752-21014162,21014274-21015026,21016040-21016444
Length = 522
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 279 GMWTSARGASSHRRYRQHGSSEWRS 205
G WT+A A + RQHG W +
Sbjct: 57 GPWTTAEDAVLVQHVRQHGEGNWNA 81
>06_03_0487 -
21352955-21353080,21353164-21353357,21353815-21353973,
21354117-21354242,21354502-21354704,21354892-21355019,
21355323-21355565,21356734-21356928
Length = 457
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -2
Query: 260 EVRLVTAATGSMGPANGA-LLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPA 93
+V + A+ GS G G L +CVEP +P G+P +G+ A
Sbjct: 309 KVDVFVASVGSGGTLTGVGRYLKMKNPSINIVCVEPSESPVISGGSPGPHKIQGTGA 365
>06_01_0358 +
2573241-2573324,2573509-2573636,2573769-2573971,
2574129-2574254,2574522-2574680,2574857-2575050,
2575251-2575376
Length = 339
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -2
Query: 260 EVRLVTAATGSMGPANGA-LLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKG-SPASQ 87
+V + A +G+ G +G L ICVEP +P G PS +G P
Sbjct: 191 KVDIFVAGSGTGGTISGVGKYLKMKNPAVKVICVEPAESPVISGGKPSRHKIQGMGPGFV 250
Query: 86 PYTLN 72
P L+
Sbjct: 251 PKNLD 255
>04_01_0357 + 4667796-4667901,4668722-4668816
Length = 66
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 225 HAAGSGGD*THLAH 266
HAAGSGGD H+ H
Sbjct: 29 HAAGSGGDLGHMGH 42
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 130 PLGQRGVLPGSTQINRKCFREGESRRAPFAGPMLPVA 240
PLG + G NR+ F +G R++ LP A
Sbjct: 814 PLGDQSATDGPDANNRRAFNKGNKRKSHDRSSKLPYA 850
>03_04_0089 - 17217235-17217461,17218298-17218418
Length = 115
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -3
Query: 241 PLPAAWVQRMALSCSRLHGNTSCLFVLSLAVLRAVQAELHQCHHRRDLQLHSHTH 77
P P VQ A S + +T CL LS++ L + RRDL LH+ H
Sbjct: 27 PAPPVAVQAAATSAVSTNRHTLCLLSLSISCLPTIFCR-RSAAVRRDL-LHTPRH 79
>02_05_0358 + 28264928-28266049
Length = 373
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 285 WVGMWTSARGASSHRRYRQHGSSEW 211
W G W SAR + SH RQ S W
Sbjct: 320 WSGRW-SARWSQSHHSNRQEDSWRW 343
>02_05_0214 + 26823580-26823981
Length = 133
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 155 GSTPRCPSGTPSMSPQKGSPASQPYTLNR 69
G +P CP+ TPS +P +P P R
Sbjct: 24 GGSPSCPTPTPS-TPTPSTPTPTPSAFGR 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,186,712
Number of Sequences: 37544
Number of extensions: 261046
Number of successful extensions: 957
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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