Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5124
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   3.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   5.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   5.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   9.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   9.0  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 268 GPHTYPSSVTLNSEPRC 318
           GP  +P S    S PRC
Sbjct: 64  GPRDFPRSHRFKSLPRC 80


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 255 HLAHWSTYL 281
           +LA+WSTYL
Sbjct: 431 NLAYWSTYL 439


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 255 HLAHWSTYL 281
           +LA+WSTYL
Sbjct: 431 NLAYWSTYL 439


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 94  LHSHTH*IEIERWQP 50
           L  H   +E+ERW+P
Sbjct: 116 LSPHLLNLEVERWRP 130


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 137 PSGTPSMSPQKGSPASQPY 81
           P+ TP  S + G P S  +
Sbjct: 889 PASTPGCSSKNGEPTSAAF 907


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -1

Query: 267 SARGASSHRRYRQHGSSEW 211
           ++RG S       HGS  W
Sbjct: 393 NSRGHSGQSSSHHHGSKSW 411


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 155 GSTPRCPSGTPSMSPQKGSP 96
           GS+P    G  +M P  G P
Sbjct: 331 GSSPHHQHGNHTMGPTMGPP 350


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,267
Number of Sequences: 438
Number of extensions: 2455
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)