Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5121
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    46   6e-05
AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    45   1e-04
AF252287-1|AAF98331.1|  694|Drosophila melanogaster MIND-MELD pr...    29   7.8  
AE014298-2299|AAS65376.1|  783|Drosophila melanogaster CG9163-PB...    29   7.8  
AE014298-2298|AAF48548.3|  840|Drosophila melanogaster CG9163-PA...    29   7.8  

>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
 Frame = +1

Query: 520 PIGFPDTPNRTTVA---VGDRFGDDDSTTP---RLPIEANGDLELIDRLSKLPVDKQPFW 681
           P+  P  P     +   V +  G    T P   RLPI+A GD + ++RL +LPVD+QPFW
Sbjct: 82  PLVHPSAPEELLASYSPVNNAAGFPAQTAPDNSRLPIDARGDRDWVNRLKQLPVDQQPFW 141


>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
 Frame = +1

Query: 526 GFPDTPNRTTVAVGDRFGDD-DSTTP---RLPIEANGDLELIDRLSKLPVDKQPFW 681
           G  D+P  TT       G    S  P   +LPI+A+GD E ++ LS+LPV++QPFW
Sbjct: 105 GAEDSPQFTTQPTSSTAGRPATSVAPVFNQLPIDAHGDREWVNHLSQLPVEQQPFW 160


>AF252287-1|AAF98331.1|  694|Drosophila melanogaster MIND-MELD
           protein.
          Length = 694

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 677 KGCLSTGNLLSLSINSKSPFASMGSLGVVE 588
           KGC ++GNL S  ++ ++   S G  GVVE
Sbjct: 79  KGCANSGNLDSWRLSRRTKHLSAGVAGVVE 108


>AE014298-2299|AAS65376.1|  783|Drosophila melanogaster CG9163-PB,
           isoform B protein.
          Length = 783

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 677 KGCLSTGNLLSLSINSKSPFASMGSLGVVE 588
           KGC ++GNL S  ++ ++   S G  GVVE
Sbjct: 168 KGCANSGNLDSWRLSRRTKHLSAGVAGVVE 197


>AE014298-2298|AAF48548.3|  840|Drosophila melanogaster CG9163-PA,
           isoform A protein.
          Length = 840

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 677 KGCLSTGNLLSLSINSKSPFASMGSLGVVE 588
           KGC ++GNL S  ++ ++   S G  GVVE
Sbjct: 168 KGCANSGNLDSWRLSRRTKHLSAGVAGVVE 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,471,970
Number of Sequences: 53049
Number of extensions: 544986
Number of successful extensions: 1285
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)