Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5120
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr... 31 0.34
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr... 31 0.34
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p... 31 0.34
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p... 31 0.34
Z81515-5|CAB04193.2| 238|Caenorhabditis elegans Hypothetical pr... 29 1.4
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 27 4.1
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 27 4.1
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 27 4.1
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 27 4.1
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 27 4.1
AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical ... 27 7.2
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -3
Query: 339 CRRLESTLVSDVGHSVSNSVR---AHVRKFSPDLKSFVFSANVLQLTGFLSLDS 187
CR+ E ++++ GH +++S AH+ KF P L + N++ + + S
Sbjct: 823 CRKQECSIITRNGHVIASSAHRAPAHLAKFDPQLFESLVKVNLVSTNSWTEVQS 876
>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -3
Query: 339 CRRLESTLVSDVGHSVSNSVR---AHVRKFSPDLKSFVFSANVLQLTGFLSLDS 187
CR+ E ++++ GH +++S AH+ KF P L + N++ + + S
Sbjct: 823 CRKQECSIITRNGHVIASSAHRAPAHLAKFDPQLFESLVKVNLVSTNSWTEVQS 876
>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -3
Query: 339 CRRLESTLVSDVGHSVSNSVR---AHVRKFSPDLKSFVFSANVLQLTGFLSLDS 187
CR+ E ++++ GH +++S AH+ KF P L + N++ + + S
Sbjct: 823 CRKQECSIITRNGHVIASSAHRAPAHLAKFDPQLFESLVKVNLVSTNSWTEVQS 876
>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -3
Query: 339 CRRLESTLVSDVGHSVSNSVR---AHVRKFSPDLKSFVFSANVLQLTGFLSLDS 187
CR+ E ++++ GH +++S AH+ KF P L + N++ + + S
Sbjct: 823 CRKQECSIITRNGHVIASSAHRAPAHLAKFDPQLFESLVKVNLVSTNSWTEVQS 876
>Z81515-5|CAB04193.2| 238|Caenorhabditis elegans Hypothetical
protein F26H11.5 protein.
Length = 238
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 163 NTGYETCNGIKAQETGQLKNIGTENEALEVRGEFAYMGPDR 285
NTG GI A+E+G+ + TE++ L+ Y+ P+R
Sbjct: 58 NTGLRRMPGISAEESGETQTFETEDDILDF---LEYLKPER 95
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 124 IRQDNDNIGV--EGYNTGYETCNGIKAQETGQLKNIGTENEALEVR--GEFAYMGPDRVT 291
+ +D+D++G +G GY T +A L + + E+R GE ++ PD T
Sbjct: 111 VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 170
Query: 292 YAVTYVANEGG 324
A+EGG
Sbjct: 171 QVTIEYASEGG 181
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 124 IRQDNDNIGV--EGYNTGYETCNGIKAQETGQLKNIGTENEALEVR--GEFAYMGPDRVT 291
+ +D+D++G +G GY T +A L + + E+R GE ++ PD T
Sbjct: 60 VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 119
Query: 292 YAVTYVANEGG 324
A+EGG
Sbjct: 120 QVTIEYASEGG 130
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 124 IRQDNDNIGV--EGYNTGYETCNGIKAQETGQLKNIGTENEALEVR--GEFAYMGPDRVT 291
+ +D+D++G +G GY T +A L + + E+R GE ++ PD T
Sbjct: 111 VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 170
Query: 292 YAVTYVANEGG 324
A+EGG
Sbjct: 171 QVTIEYASEGG 181
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 124 IRQDNDNIGV--EGYNTGYETCNGIKAQETGQLKNIGTENEALEVR--GEFAYMGPDRVT 291
+ +D+D++G +G GY T +A L + + E+R GE ++ PD T
Sbjct: 70 VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 129
Query: 292 YAVTYVANEGG 324
A+EGG
Sbjct: 130 QVTIEYASEGG 140
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 124 IRQDNDNIGV--EGYNTGYETCNGIKAQETGQLKNIGTENEALEVR--GEFAYMGPDRVT 291
+ +D+D++G +G GY T +A L + + E+R GE ++ PD T
Sbjct: 52 VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKT 111
Query: 292 YAVTYVANEGG 324
A+EGG
Sbjct: 112 QVTIEYASEGG 122
>AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical
protein Y45G12B.3 protein.
Length = 433
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 178 TCNGIKAQETGQLKNIGTENEALEVRGEFAYMGPDR 285
TC G+++ L T+ + + RGE+ + P++
Sbjct: 227 TCAGLQSDRVAALSGCSTDPKIVPFRGEYLLLKPEK 262
>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
protein K09F6.3 protein.
Length = 1360
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +1
Query: 265 AYMGPDRVTYAVTYVANEGGFQPSAPHIPKA*VN 366
+Y+G + T+ V + + +G + +AP +P+ +N
Sbjct: 1119 SYLGEKKKTHTVKHYSYKGWIEKNAPELPREILN 1152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,694,457
Number of Sequences: 27780
Number of extensions: 135873
Number of successful extensions: 376
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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