Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5118
         (371 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ141697-1|AAZ73088.1|  578|Drosophila melanogaster NDC1 protein.      29   2.6  
AY061468-1|AAL29016.1|  578|Drosophila melanogaster LD42327p pro...    29   2.6  
AE014297-3404|AAF56202.1|  578|Drosophila melanogaster CG5857-PA...    29   2.6  
AY051978-1|AAK93402.1| 1412|Drosophila melanogaster LD44770p pro...    28   3.4  
AE014134-2038|AAF53077.1| 1412|Drosophila melanogaster CG4751-PA...    28   3.4  
AY118343-1|AAM48372.1|  488|Drosophila melanogaster LD46760p pro...    27   6.0  
AE014298-1175|AAF46371.2|  488|Drosophila melanogaster CG1440-PA...    27   6.0  

>DQ141697-1|AAZ73088.1|  578|Drosophila melanogaster NDC1 protein.
          Length = 578

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = +1

Query: 169 FVILSYFLVCG*FQSL--FAWLDKCLRIVGDWYS 264
           F++L+ FL+   FQ L   AW+   LR+V  WY+
Sbjct: 30  FLLLTVFLLFVNFQLLHPLAWVTGTLRLVASWYT 63


>AY061468-1|AAL29016.1|  578|Drosophila melanogaster LD42327p
           protein.
          Length = 578

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = +1

Query: 169 FVILSYFLVCG*FQSL--FAWLDKCLRIVGDWYS 264
           F++L+ FL+   FQ L   AW+   LR+V  WY+
Sbjct: 30  FLLLTVFLLFVNFQLLHPLAWVTGTLRLVASWYT 63


>AE014297-3404|AAF56202.1|  578|Drosophila melanogaster CG5857-PA
           protein.
          Length = 578

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = +1

Query: 169 FVILSYFLVCG*FQSL--FAWLDKCLRIVGDWYS 264
           F++L+ FL+   FQ L   AW+   LR+V  WY+
Sbjct: 30  FLLLTVFLLFVNFQLLHPLAWVTGTLRLVASWYT 63


>AY051978-1|AAK93402.1| 1412|Drosophila melanogaster LD44770p
           protein.
          Length = 1412

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 262 NTNHLLCVDTYPTKQTSFEINRIQENTKELQKESLTTTLM 143
           NT+ L    TYP + T F+  R  E  +++QK  +   L+
Sbjct: 316 NTHTLSITKTYPCRSTRFDRQRAGEVERDIQKMMIQDQLL 355


>AE014134-2038|AAF53077.1| 1412|Drosophila melanogaster CG4751-PA
           protein.
          Length = 1412

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 262 NTNHLLCVDTYPTKQTSFEINRIQENTKELQKESLTTTLM 143
           NT+ L    TYP + T F+  R  E  +++QK  +   L+
Sbjct: 316 NTHTLSITKTYPCRSTRFDRQRAGEVERDIQKMMIQDQLL 355


>AY118343-1|AAM48372.1|  488|Drosophila melanogaster LD46760p
           protein.
          Length = 488

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 185 YERITKRVPYYNINDNYILITNPR 114
           YER  K  P++N+ D   L+T+PR
Sbjct: 288 YERYVK--PHFNVEDKVCLVTDPR 309


>AE014298-1175|AAF46371.2|  488|Drosophila melanogaster CG1440-PA
           protein.
          Length = 488

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 185 YERITKRVPYYNINDNYILITNPR 114
           YER  K  P++N+ D   L+T+PR
Sbjct: 288 YERYVK--PHFNVEDKVCLVTDPR 309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,007,537
Number of Sequences: 53049
Number of extensions: 321755
Number of successful extensions: 602
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)