Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5115
(412 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0363 + 2827990-2828055,2828215-2829306,2829715-2829837,282... 35 0.022
08_02_0130 - 12900202-12900277,12901457-12901536,12901654-129017... 33 0.089
05_03_0185 + 9348559-9348958,9349560-9349687,9349782-9349808,935... 32 0.21
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 29 1.1
07_03_1163 - 24439976-24440023,24440562-24440597,24440932-244410... 29 1.4
06_03_1454 - 30261240-30261470,30261896-30262615,30262700-302628... 29 1.4
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 29 1.9
05_03_0681 + 16892502-16892575,16892719-16893097 28 3.3
11_01_0699 - 5757410-5757458,5757760-5757831,5758084-5758152,575... 27 4.4
06_01_0936 - 7220333-7220508,7221208-7221327,7221898-7223089 27 4.4
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 27 4.4
08_02_1379 - 26540012-26540587,26540804-26540995,26541777-265418... 27 5.8
05_03_0416 + 13684604-13688050 27 5.8
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820... 27 5.8
04_04_1180 - 31519713-31521419,31522308-31522533,31524097-31524215 27 7.7
01_06_1103 - 34543915-34543955,34544069-34544137,34544294-345443... 27 7.7
>03_01_0363 +
2827990-2828055,2828215-2829306,2829715-2829837,
2829994-2830110,2830248-2830429,2830558-2830744,
2830846-2831055,2831177-2831305,2832179-2832247,
2832751-2832873,2832957-2833007,2833101-2833250
Length = 832
Score = 35.1 bits (77), Expect = 0.022
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 83 IENNFIAACLDGNVYHFNSDGQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYY 262
I N F+A+C GN + TL G L V C+ I + G + TGS D ++ +
Sbjct: 453 IVNIFLASCKLGNAVFTMDSLKFALTLYGHKLPVLCMDISSD--GVLIVTGSADKNLKIW 510
Query: 263 DLETG 277
++ G
Sbjct: 511 GMDFG 515
>08_02_0130 -
12900202-12900277,12901457-12901536,12901654-12901740,
12902475-12902636,12904766-12904855,12904959-12905078,
12905671-12905798,12905873-12906272
Length = 380
Score = 33.1 bits (72), Expect = 0.089
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 119 NVYHFNSDGQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYDLETGVE 283
NV+ F +G L T RG N AV + ++ T + TGS D + +D++TG E
Sbjct: 35 NVW-FADNGDRLGTYRGHNGAVWSCDVSRDS--TRLITGSADQTAKLWDVQTGRE 86
>05_03_0185 +
9348559-9348958,9349560-9349687,9349782-9349808,
9350250-9350369,9350474-9350563,9351206-9351292,
9351410-9351489,9352843-9352918
Length = 335
Score = 31.9 bits (69), Expect = 0.21
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 119 NVYHFNSDGQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYDLETGVE 283
NV+ F +G L T G N AV + ++ T + TGS D + +D++TG E
Sbjct: 35 NVW-FADNGDRLGTYSGHNGAVWSCDVSRDS--TRLITGSADQTAKLWDVQTGAE 86
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 161 LRGSNLAVTCI-TIVKEKYGTTVYTGSLDSRIRYYDLE 271
L G V CI T + T V TGS DS +R +D+E
Sbjct: 405 LSGHTEIVVCIDTCISSSGKTLVVTGSKDSTVRLWDME 442
>07_03_1163 -
24439976-24440023,24440562-24440597,24440932-24441018,
24441349-24441492,24441782-24441916,24442215-24442279,
24442395-24442477,24442607-24442642,24443343-24443449,
24443558-24443658,24443750-24443909
Length = 333
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 140 DGQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYDLETGVE 283
+G +T G V+ +T + + T+Y+ S D +R +D++TG E
Sbjct: 229 EGSATSTFLGHTQCVSAVTWPERQ---TIYSASWDHSVRQWDVQTGKE 273
>06_03_1454 -
30261240-30261470,30261896-30262615,30262700-30262843,
30262953-30263204,30263542-30263751
Length = 518
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +2
Query: 140 DGQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYDLETGVEKGPECNVLSAIQ 319
DG+L+ ++G V C+ + YG + +D I+ + G E E S
Sbjct: 394 DGELMRVMKGDKQIVNCVE--QHPYGIVIANCGIDKDIKIW-APGGSENPDEVETDSCCS 450
Query: 320 TMDRAWDTIF 349
+ ++D+++
Sbjct: 451 DISESYDSVY 460
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 143 GQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYDLET 274
G+LL+ R + C+ ++ + TGS D ++++DLET
Sbjct: 180 GKLLHDFRNHEGPINCLDFHPHEF--LLATGSADKTVKFWDLET 221
>05_03_0681 + 16892502-16892575,16892719-16893097
Length = 150
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 110 LDGNVYHFNSDGQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYD 265
L G+V + S G L + R S L +T IT+ T+ + D RIR D
Sbjct: 20 LVGHVGNVTSGGGRLGSTRDSRLRITPITVTTAGSTTSFAACARDGRIRATD 71
>11_01_0699 -
5757410-5757458,5757760-5757831,5758084-5758152,
5758329-5758477,5758568-5758699,5758784-5759109,
5759330-5759399,5759684-5759738,5760322-5760377,
5760500-5760700,5761466-5761651,5761756-5761906,
5761978-5762206,5762321-5762582,5762858-5762959
Length = 702
Score = 27.5 bits (58), Expect = 4.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 101 AACLDGNVYHFNSDGQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYDLET 274
A+ ++ V++F S + TL G AV+C + TGSLD R +D ++
Sbjct: 540 ASMMNVQVWNFRSSRREF-TLFGHGSAVSCFDYFTRGNQQYIITGSLDKTARIWDCKS 596
>06_01_0936 - 7220333-7220508,7221208-7221327,7221898-7223089
Length = 495
Score = 27.5 bits (58), Expect = 4.4
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 8 STDENLRRDAITVTGNADAVLAIECIENNFIAACLDGNVYHFNSDGQLLNTLRGSNLAVT 187
S D +L+ + A++V A N + A DG+VY ++DG + R +
Sbjct: 181 SWDRSLKAWRLPGLRCAESVAAAHDDAINAVVAAPDGHVYTASADGTVKAWRRRTGQKKL 240
Query: 188 CITIVKEKYGTTV 226
+ V E++G V
Sbjct: 241 SLVCVMERHGAAV 253
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 143 GQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYDLET 274
G+LL+ + + + CI +++ + TGS D ++++DLET
Sbjct: 272 GKLLHDFKFHSGQIRCIDFHPQEF--LLATGSADRTVKFWDLET 313
>08_02_1379 -
26540012-26540587,26540804-26540995,26541777-26541812,
26542255-26542488
Length = 345
Score = 27.1 bits (57), Expect = 5.8
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 406 MSMLFLHSNCSTNPVLVPYEYSVPGAIHSLDCTKNIALRALFHSCL*IVISYPRIQRTSI 227
+S + S+C +V YE S I+ T LR FH CL V Y +++ +
Sbjct: 33 LSAGYYSSSCPKLESIVRYEVS--RKINETVVTIPAVLRLFFHDCLVTVFRYLQLEEKNQ 90
Query: 226 DC 221
C
Sbjct: 91 GC 92
>05_03_0416 + 13684604-13688050
Length = 1148
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 403 SMLFLHSNCST-NPVLVPYEYSVPGAIHSLDCTK 305
S++ + NC+T PVL+ +E+ IH +DC K
Sbjct: 453 SVILDNENCTTFPPVLLKFEFLGYLEIHGVDCKK 486
>02_05_0300 +
27681204-27681656,27681745-27681840,27681933-27682022,
27682126-27682227,27682310-27682456,27683608-27683748,
27683749-27683808,27685133-27685230,27685308-27685410,
27685954-27686037
Length = 457
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 107 CLDGNVYHFNSDGQLLNTLRGSNLAVTCITIVKEKYGTTVYTGSLDSRIRYYDLETG 277
C + Y + +L L+G VT I + +Y+GS D +R +D +TG
Sbjct: 128 CRYPHSYSMSDSITMLTPLQGHEKVVTGIALPAGS--DKLYSGSKDGTVRMWDCQTG 182
>04_04_1180 - 31519713-31521419,31522308-31522533,31524097-31524215
Length = 683
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 224 VYTGSLDSRIRYYDLETG--VEKG-PECNVLSAI 316
++TG DS IR +DLE G ++K P C + AI
Sbjct: 315 IFTGGNDSVIRMWDLEEGLLIDKSRPLCCTIRAI 348
>01_06_1103 -
34543915-34543955,34544069-34544137,34544294-34544395,
34545603-34545708,34545998-34546079,34546850-34547142
Length = 230
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 119 NVYHFNSDGQLLNTLRGSNLAVTCITIV 202
+VYHFN + L T G V C+++V
Sbjct: 188 SVYHFNGNNVDLGTACGKYYRVCCLSVV 215
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,899,383
Number of Sequences: 37544
Number of extensions: 215197
Number of successful extensions: 480
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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