Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5114
         (304 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23519-4|AAK31501.1|  358|Caenorhabditis elegans Toxin-regulated...    28   1.1  
AF022972-4|AAC48236.2|  528|Caenorhabditis elegans Udp-glucurono...    27   2.0  
Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical p...    27   3.4  
Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical pr...    27   3.4  
AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic catio...    27   3.4  
Z34533-5|CAA84298.1|  781|Caenorhabditis elegans Hypothetical pr...    26   4.5  
Z80344-5|CAE17795.1|   92|Caenorhabditis elegans Hypothetical pr...    25   7.9  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    25   7.9  

>U23519-4|AAK31501.1|  358|Caenorhabditis elegans Toxin-regulated
           target of p38mapkprotein 2 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 185 VNIKKSFDFLFFLALSTSSVLPADSLE*TSRLQFCL 292
           VN +K+F+F    ++S   +LP D    T+RL+ C+
Sbjct: 184 VNFQKTFNFPKERSISLEMLLPTDVFTTTARLENCI 219


>AF022972-4|AAC48236.2|  528|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein37 protein.
          Length = 528

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 161 VIVILFICVNIKKSFDFLFFLAL 229
           ++++LF C N+  S++FL F  L
Sbjct: 3   ILILLFACFNVNFSYNFLIFSPL 25


>Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical
           protein F52F12.1a protein.
          Length = 585

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 44  SNYDTEPIKFSNKKKNQSVSEKERKKLLRVIDFFK 148
           SN D + +  S K    +  EKE K+   V D FK
Sbjct: 318 SNVDVDELVDSMKNHQNAAEEKETKRSHNVTDLFK 352


>Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical
           protein F52F12.1b protein.
          Length = 568

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 44  SNYDTEPIKFSNKKKNQSVSEKERKKLLRVIDFFK 148
           SN D + +  S K    +  EKE K+   V D FK
Sbjct: 301 SNVDVDELVDSMKNHQNAAEEKETKRSHNVTDLFK 335


>AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic cation
           transporter 1 protein.
          Length = 568

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 44  SNYDTEPIKFSNKKKNQSVSEKERKKLLRVIDFFK 148
           SN D + +  S K    +  EKE K+   V D FK
Sbjct: 301 SNVDVDELVDSMKNHQNAAEEKETKRSHNVTDLFK 335


>Z34533-5|CAA84298.1|  781|Caenorhabditis elegans Hypothetical
           protein B0285.7 protein.
          Length = 781

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 287 KTAIDLFTPRSLQEAQKT*TELRRIKSQKIFLCLRK*IE 171
           K  +    PR+L E   +   LR+IKSQ   LC  + +E
Sbjct: 508 KMEVSKIRPRNLNETADSVRVLRQIKSQSSNLCSPRFVE 546


>Z80344-5|CAE17795.1|   92|Caenorhabditis elegans Hypothetical
           protein F15D4.8 protein.
          Length = 92

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 209 FLFFLALSTSSVLPAD 256
           FL  L LST++VLPAD
Sbjct: 15  FLLILQLSTAAVLPAD 30


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 273 LVYSKESAGSTEDVDRAKKNKKSKDFF 193
           L+  KES    E  D+ K  KKSK FF
Sbjct: 227 LMVKKESQTVKEVKDKNKDKKKSKSFF 253


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,834,413
Number of Sequences: 27780
Number of extensions: 96251
Number of successful extensions: 337
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)