Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5113
         (584 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot...    29   6.1  
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot...    29   6.1  
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit...    29   6.1  
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit...    29   6.1  
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me...    29   6.1  
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE...    29   6.1  
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC...    29   6.1  
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB...    29   6.1  
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD...    29   6.1  
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA...    29   6.1  

>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
            trxI protein.
          Length = 3358

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1530 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1589

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1590 VDHTNPNSKEVQ 1601


>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
            trxII protein.
          Length = 3726

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1898 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1957

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1958 VDHTNPNSKEVQ 1969


>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trithorax
            protein protein.
          Length = 3358

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1530 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1589

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1590 VDHTNPNSKEVQ 1601


>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trithorax
            protein protein.
          Length = 3726

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1898 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1957

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1958 VDHTNPNSKEVQ 1969


>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
            D.melanogaster zinc-binding protein (trithorax) mRNA,
            complete cds. ).
          Length = 3759

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1898 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1957

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1958 VDHTNPNSKEVQ 1969


>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
            isoform E protein.
          Length = 3358

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1530 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1589

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1590 VDHTNPNSKEVQ 1601


>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
            isoform C protein.
          Length = 3358

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1530 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1589

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1590 VDHTNPNSKEVQ 1601


>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
            isoform B protein.
          Length = 3358

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1530 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1589

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1590 VDHTNPNSKEVQ 1601


>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
            isoform D protein.
          Length = 3726

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1898 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1957

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1958 VDHTNPNSKEVQ 1969


>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
            isoform A protein.
          Length = 3726

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 302  GNIVI*ESYQWTTIANLYLLIGWLVWRMESPYKLVPPSKRSSIRNNLD----LDFGSQYG 469
            G IV   S  +  +  +  L   L W  + P+K+V  + R++I+N+      LD G  Y 
Sbjct: 1898 GAIVPRFSDSYEAVVPINFLCSRLYWSSKEPWKIVEYTVRTTIQNSSSTLTALDVGRNYT 1957

Query: 470  WGHSR*DLYELQ 505
              H+  +  E+Q
Sbjct: 1958 VDHTNPNSKEVQ 1969


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,442,516
Number of Sequences: 53049
Number of extensions: 652891
Number of successful extensions: 1438
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)