Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5111
(614 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 71 1e-13
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 62 6e-11
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 62 6e-11
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c... 56 3e-09
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 55 9e-09
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 29 0.40
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 27 1.6
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 27 2.2
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 26 3.8
SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter M... 26 5.0
SPBC609.04 |caf5||spermine family transmembrane transporter Caf5... 25 6.6
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 25 6.6
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 25 8.7
SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr 2|||... 25 8.7
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 71.3 bits (167), Expect = 1e-13
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Frame = +2
Query: 17 TDQNDAAQLKELAIDSNKYDDWRHLHYPHL--AEVLAQFPSCRXXXXXXXXXXXXXXXRF 190
TD+ + A L+ L + D R L A+VL +F + R
Sbjct: 733 TDEKERADLQILISPAGAPDFKRRAEVDMLTYADVLKEFKHAKLTAAQIAQIVPVIKRRE 792
Query: 191 YSISSSPLAHPHRIHITCAVVVYRTQNGQGPMHYGVCSTYLQNLKPEDEALVFIRRAPSF 370
YSISSS H +H+ VV ++ +G G YG CS YL NLK + V ++ +
Sbjct: 793 YSISSSQKKHNDSVHLLVVVVGWK--DGMGRDRYGQCSHYLSNLKVGEPLCVAVKTS-VM 849
Query: 371 HMPKDLSAPLILVGPGSGIAPFRGFWHHRKHQIKNLIPNKQKPGPVWLFFGCRNRGMD-L 547
+P P+++ G G+G+APFR F ++ Q I + G + L+ G R + + L
Sbjct: 850 KLPTSPLKPIVMAGLGTGLAPFRAFLQFKEWQRMQGI----ESGDILLYLGSRTQREEYL 905
Query: 548 YKEEKE 565
Y E+ E
Sbjct: 906 YGEDWE 911
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 62.1 bits (144), Expect = 6e-11
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 25/150 (16%)
Frame = +2
Query: 185 RFYSISSSPLAHPHRIHITCAVVVYRTQNGQGPMHYGVCSTYL----QNLK----PEDEA 340
R+YSISSS + HP ++H+T AVV + + + YG+ + YL +++ P
Sbjct: 441 RYYSISSSSVVHPDKVHVT-AVVDKKEWTDKNHIFYGLTTNYLLAHCRHMHGEKIPHPNG 499
Query: 341 LVFIRRAP---------------SFHM-PKDLSAPLILVGPGSGIAPFRGFWHHRKHQIK 472
L + P +F + P D+ P+I+VGPG+G+APFRGF R
Sbjct: 500 LEYTLEGPRKNWTGKIPMFVKKSTFRLAPPDV--PIIMVGPGTGVAPFRGFVMER----A 553
Query: 473 NLIPNKQKPGPVWLFFGCRNRGMD-LYKEE 559
NL K LF+GC+ D LYKEE
Sbjct: 554 NLASKGVKVAKTLLFYGCQYSDKDFLYKEE 583
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 62.1 bits (144), Expect = 6e-11
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Frame = +2
Query: 104 LAEVLAQFPSCRXXXXXXXXXXXXXXXRFYSISSSPLAHPHRIHITCAVVVYRTQNGQGP 283
L ++L FPSC R+YSIS+ P R+ + V Y + NGQ
Sbjct: 321 LPDILEAFPSCHPPVDHLISALPQLMPRWYSISNDPSLANKRLEMAFTVQEYHSPNGQS- 379
Query: 284 MHYGVCSTYLQNL-----KPEDEALVFIRR--APSFH------MPKDL--SAPLILVGPG 418
G+C+ +L++L K + + ++ P F K+ P+ L+G G
Sbjct: 380 -RTGICTGFLEDLALAFLKARHDGSLANKKFTVPMFRGVQQNPFAKEFHNDGPMCLIGAG 438
Query: 419 SGIAPFRGFWHHRKHQIKNLIPNKQKPGPVWLFFGCRNRGMD-LYKEE 559
GIAPFRGF ++ + N G VW+ GCR++ +D LY E
Sbjct: 439 VGIAPFRGF-------VQRRLANAACTGKVWIIQGCRDQKLDELYHGE 479
>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 571
Score = 56.4 bits (130), Expect = 3e-09
Identities = 51/176 (28%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Frame = +2
Query: 92 HYPHLAEVLAQFPSCRXXXXXXXXXXXXXXXRFYSISSSPLAHPHRIHITCAVVVYRTQN 271
H L +L FPS + R+YS+S+ P + + AV V
Sbjct: 289 HNVTLITLLKAFPSVQLPLDHLLTVLPQLMPRWYSLSNDPKVSNNVLEF--AVTVVEINK 346
Query: 272 GQGPMHYGVCSTYLQNLK------PEDEALVFIR----RAPSFHMPKDLSAPLILVGPGS 421
+G G+ S +L+ L D L R A + H D P+ L+G G
Sbjct: 347 VEGGTRSGIGSGFLKRLALRFLNGERDLVLPMYRGLHKNAFATHFASD--GPMCLIGAGV 404
Query: 422 GIAPFRGFWHHRKHQIKNLIPNKQKPGPVWLFFGCRNRGMD-LYKEEKEKALADGS 586
G+APFRGF ++ + N G VW+F GCR++ +D LY E E L S
Sbjct: 405 GVAPFRGF-------VQRRLTNATCAGKVWVFHGCRDQELDELYHGEWENPLQKSS 453
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 54.8 bits (126), Expect = 9e-09
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Frame = +2
Query: 38 QLKELAIDSNKYDDWRHLHYPH--LAEVLAQFPSCRXXXXXXXXXXXXXXXRFYSISSSP 211
+L+E + N D + + P + E L +F S + R YSI++
Sbjct: 296 RLQEFSSYKNIDDYYDYTTRPRRTVLETLQEFKSVQIPIEYALDAFPVIRGRQYSIANRC 355
Query: 212 LAHPHRIHITCAVVVYRTQNGQGPMHYGVCSTYLQNLKPEDEALVFIRRAPSF-HMPKDL 388
+ + A+V Y+T + P G+CS ++ +L + I P F ++
Sbjct: 356 DNSTGILELAVALVKYQTIL-KSPRQ-GICSRWICDLHENTSFNIDI--LPGFLNLSYQS 411
Query: 389 SAPLILVGPGSGIAPFRGFWHHRKHQIKNLIPNKQKPGPVWLFFGCRNRGMD-LYKEEKE 565
+ PLI+VGPG+G+AP R I+ I N K LFFGCRN+ MD L++++ E
Sbjct: 412 NKPLIMVGPGTGVAPLRAL-------IQERIYNGLKEN--LLFFGCRNKSMDFLFEKDWE 462
Query: 566 KALADGSIE 592
K +G+++
Sbjct: 463 KYTEEGTLK 471
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 29.5 bits (63), Expect = 0.40
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 442 ILASQKASDQEFDTEQTKTR 501
IL+SQ+A D+EFD Q +TR
Sbjct: 299 ILSSQRADDKEFDVNQLETR 318
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 611 KCQENFAQYSHRLTLFLFLLYTN--PFLCFCSRRTTRQD 501
+C + F + H L + L+T+ PF+C C +R +R+D
Sbjct: 427 ECSKKFKRSEH-LRRHIRSLHTSEKPFVCICGKRFSRRD 464
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 371 HMPKDLSAPLILVGPGSGIAPFRGFWHHRKHQIK 472
H PK+LS I P + + + G + ++HQ+K
Sbjct: 131 HAPKNLSFEEIATLPCAAVTAWNGLFGSKEHQVK 164
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 3.8
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 52 SHRFKQIRRLEASPLSTLGRSTSAVPFMSTSSIFASGSTTIVTAEVLLHIFITTSASS*N 231
S KQ ++E SP S L + + V S S + S+ +TAE + S+ +
Sbjct: 541 SENRKQADKVELSPSSLLRQMSLPVDSSSQSDAQCTTSSVYITAERKAFSQSSIDLSTLS 600
Query: 232 SHHM 243
+HH+
Sbjct: 601 NHHV 604
>SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter
Mfs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 531
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 606 PRKLCSILPSANAFSFSSLYKSIPLFLQPKNNQTGPGFCLFG 481
P+ + S+ + NA SS+ + PL+ + N TGP + G
Sbjct: 456 PKYVASVF-AGNALFRSSMAAASPLYARAMFNNTGPSYAPVG 496
>SPBC609.04 |caf5||spermine family transmembrane transporter
Caf5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 606 PRKLCSILPSANAFSFSSLYKSIPLFLQPKNNQTGPGF 493
P+ + S+ + F S++ S PLF + N TGP +
Sbjct: 456 PKYVASVFAGNDLFR-SAMAASFPLFARAMFNNTGPSY 492
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 35 AQLKELAIDSNKYDDWRHLH 94
A+++ L KY DW+HLH
Sbjct: 965 AKVQNLHYGFRKYIDWKHLH 984
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 582 PSANAFSFSSLYKSIPLFLQPKNNQ 508
P +N+FS SSL +S LFLQ N Q
Sbjct: 617 PKSNSFSTSSLIQS--LFLQLDNKQ 639
>SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 565
Score = 25.0 bits (52), Expect = 8.7
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = +2
Query: 254 VYRTQNGQGPMHYGVCSTYLQNLKPEDEALVFIRRAPSFHMPKDLSAPLILVGPGSGIAP 433
+ R NG G + ST L EAL F++ P P ++ + P +A
Sbjct: 111 IVRGWNGSGKSFGAMLST----LSMYFEALKFLKHNPVAGKPVQSGCQVLFIVPNDNLAA 166
Query: 434 FRGFWHHR 457
FW R
Sbjct: 167 QYQFWIER 174
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,668,438
Number of Sequences: 5004
Number of extensions: 55914
Number of successful extensions: 186
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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