Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5111
(614 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,875... 124 4e-29
09_06_0260 - 21911358-21911438,21911715-21911828,21911911-219120... 116 1e-26
02_01_0030 - 183836-183903,183986-184453,184526-184604,184698-18... 66 2e-11
01_06_0610 - 30587269-30587717,30587996-30588212,30588363-305884... 54 2e-11
06_01_0056 - 478424-478491,478587-478821,478916-478978,479102-47... 64 6e-11
04_04_1410 + 33363784-33364086,33364221-33364280,33364388-333644... 63 2e-10
03_06_0206 - 32353308-32353566,32353784-32354024,32354408-323546... 58 6e-09
07_01_0347 - 2509229-2509487,2509682-2509922,2510292-2510511,251... 53 2e-07
02_05_0508 - 29623173-29623301,29623410-29623575,29623691-296237... 32 0.31
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 29 2.9
06_02_0176 + 12637287-12637376,12638108-12638280,12638631-126387... 29 3.9
02_05_0114 + 25958834-25961296 29 3.9
10_01_0078 - 1012031-1012084,1012998-1013105,1013610-1013661,101... 28 6.8
05_05_0042 - 21798255-21798871,21799400-21799777,21799861-218008... 28 6.8
11_06_0197 + 21149453-21149630,21149930-21149996,21150142-211502... 27 8.9
10_07_0056 + 12451510-12451554,12453099-12453149,12453754-124538... 27 8.9
>08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,
8755481-8755622,8755736-8755772,8755852-8755921,
8756021-8756212,8756321-8756413,8756545-8756773,
8756861-8756944,8757041-8757192,8757279-8757375,
8757576-8757725,8757813-8757890,8757982-8758104,
8758169-8758315,8758418-8758472,8758807-8758874
Length = 737
Score = 124 bits (300), Expect = 4e-29
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 10/211 (4%)
Frame = +2
Query: 2 LSKACTDQNDAAQLKELAIDSNK--YDDWRHLHYPHLAEVLAQFPSCRXXXXXXXXXXXX 175
L+ +D +A +L+ LA + K Y W L EV+A+FPS +
Sbjct: 426 LATYASDSTEADRLRFLASPAGKDEYAQWVVASQRSLLEVMAEFPSAKPPLGVFFAAVAP 485
Query: 176 XXX-RFYSISSSPLAHPHRIHITCAVVVYRTQNGQGPMHYGVCSTYLQNLKPEDE----- 337
R+YSISSSP P RIH+TCA+V +T G+ +H GVCST+++N P +E
Sbjct: 486 RLQPRYYSISSSPSMAPTRIHVTCALVHEKTPAGR--VHKGVCSTWIKNAIPSEETKDCS 543
Query: 338 -ALVFIRRAPSFHMPKDLSAPLILVGPGSGIAPFRGFWHHRKHQIKNLIPNKQKPGPVWL 514
A VF+R++ +F +P D S P+I++GPG+G+APFRGF R Q + + + G
Sbjct: 544 WAPVFVRQS-NFKLPADPSVPVIMIGPGTGLAPFRGFLQERLSQKQ----SGAELGRSVF 598
Query: 515 FFGCRNRGMD-LYKEEKEKALADGSIEQSFL 604
FFGCRN MD +Y++E L +G++ + L
Sbjct: 599 FFGCRNSKMDFIYEDELNTFLEEGALSELVL 629
>09_06_0260 - 21911358-21911438,21911715-21911828,21911911-21912033,
21912342-21912419,21912498-21912647,21913505-21913601,
21913679-21913860,21913899-21913982,21914243-21914303,
21914414-21914506,21914588-21914782,21914937-21915006,
21915536-21915572,21915654-21915737,21915828-21915885,
21916008-21916084,21916185-21916244,21916325-21916687
Length = 668
Score = 116 bits (280), Expect = 1e-26
Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 20/218 (9%)
Frame = +2
Query: 2 LSKACTDQNDAAQLKELAIDSNK------------YDDWRHLHYPHLAEVLAQFPSCRXX 145
L+ +D DA +L+ LA + K Y W L EV+ +FPS +
Sbjct: 372 LASHASDPKDAERLRHLASPAGKFWLHMSFIWQKEYSQWIVSSQRSLLEVMTEFPSAKPP 431
Query: 146 XXXXXXXXXXXXX-RFYSISSSPLAHPHRIHITCAVVVYRTQNGQGPMHYGVCSTYLQNL 322
R+YSISSSP P RIH+TCA+V +T G+ +H GVCST+++N
Sbjct: 432 LGVFFAAIAPRLQPRYYSISSSPRMTPTRIHVTCALVYGQTPTGR--IHKGVCSTWMKNS 489
Query: 323 KPEDE------ALVFIRRAPSFHMPKDLSAPLILVGPGSGIAPFRGFWHHRKHQIKNLIP 484
P +E A +F+R++ +F +P D + P+I++GPG+G+APFRGF R L
Sbjct: 490 IPLEESQECSWAPIFVRQS-NFKLPTDPTVPIIMIGPGTGLAPFRGFLQER----LALKE 544
Query: 485 NKQKPGPVWLFFGCRNRGMD-LYKEEKEKALADGSIEQ 595
+ G LFFGCRNR MD +Y++E + G++ +
Sbjct: 545 TGVELGHAVLFFGCRNRKMDFIYEDELNNFVETGALSE 582
>02_01_0030 -
183836-183903,183986-184453,184526-184604,184698-185183
Length = 366
Score = 66.1 bits (154), Expect = 2e-11
Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Frame = +2
Query: 185 RFYSISSSPL---AHPHRIHITCAVVVYRTQNGQGPMHYGVCSTYLQNLKPEDEALVFIR 355
R YSI+SS + A + + +VY N QG + GVCS +L +LKP + +
Sbjct: 145 RLYSIASSAIGDFADSKTVSLCVKRLVYT--NDQGEIVKGVCSNFLCDLKPGSDVKITGP 202
Query: 356 RAPSFHMPKDLSAPLILVGPGSGIAPFRGF-WHHRKHQIKNLIPNKQKPGPVWLFFGCRN 532
MPKD +A +I++G G+GIAPFR F W + + N G WLF G
Sbjct: 203 VGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEEHDDYKFN----GLAWLFLGVPT 258
Query: 533 RGMDLYKEEKEK 568
LY+EE E+
Sbjct: 259 SSTLLYREEFER 270
>01_06_0610 -
30587269-30587717,30587996-30588212,30588363-30588482,
30589092-30589202,30589300-30589374,30589940-30590031,
30590121-30590302,30590479-30590570,30591179-30591283,
30591374-30591451,30591553-30591705
Length = 557
Score = 53.6 bits (123), Expect(2) = 2e-11
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +2
Query: 104 LAEVLAQFPSCRXXXXXXXXXXXXXXXRFYSISSSPLAHPHRIHITCAVVVYRTQNGQGP 283
+ EVL FPS + R +SISSSPLA P++IH+T ++V +RT +
Sbjct: 334 ILEVLDDFPSVQMPFEWLVQLTPPLKKRAFSISSSPLAKPNQIHLTVSIVSWRTPFKR-- 391
Query: 284 MHYGVCSTYLQNLKPED 334
M G+CS++L L P +
Sbjct: 392 MRRGLCSSWLAGLNPNE 408
Score = 32.3 bits (70), Expect(2) = 2e-11
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 416 GSGIAPFRGFWHHRKHQIKNLIPNKQKPGPVWLFFGCRNRGMD-LYKE 556
G+G APF F R Q + P+ FFGCRN+ D LYK+
Sbjct: 409 GTGCAPFCAFVAERAAQ-----STSEATAPILFFFGCRNQENDFLYKD 451
>06_01_0056 -
478424-478491,478587-478821,478916-478978,479102-479179,
479263-479354,479788-479866,479971-480104,480184-480523
Length = 362
Score = 64.5 bits (150), Expect = 6e-11
Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Frame = +2
Query: 185 RFYSISSSPLAH---PHRIHITCAVVVYRTQNGQGPMHYGVCSTYLQNLKPEDEALVFIR 355
R YSI+SS L + + +VY N QG + GVCS +L +LKP + +
Sbjct: 141 RLYSIASSALGDFGDSKTVSLCVKRLVYT--NDQGEIVKGVCSNFLCDLKPGSDVKITGP 198
Query: 356 RAPSFHMPKDLSAPLILVGPGSGIAPFRGF-WHHRKHQIKNLIPNKQKPGPVWLFFGCRN 532
MPKD +A +I++ G+GIAPFR F W + + N G WLF G
Sbjct: 199 VGKEMLMPKDPNANIIMLATGTGIAPFRSFLWKMFFEKYDDYKFN----GLAWLFLGVPT 254
Query: 533 RGMDLYKEEKEKALA 577
LYKEE +K A
Sbjct: 255 SSSLLYKEEFDKMKA 269
>04_04_1410 +
33363784-33364086,33364221-33364280,33364388-33364464,
33365032-33365089,33365179-33365262,33365358-33365394,
33365855-33365924,33366655-33366849,33366947-33367039,
33367187-33367418,33367515-33367598,33368205-33368301,
33368510-33368577,33368662-33368739,33368823-33368945,
33369059-33369172,33369288-33369368
Length = 617
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +2
Query: 368 FHMPKDLSAPLILVGPGSGIAPFRGFWHHRKHQIKNLIPNKQKPGPVWLFFGCRNRGMD- 544
F M +D + P+I++GPG+G+APFRGF R L + + G LFFGCRNR MD
Sbjct: 459 FDMDEDPTTPIIMIGPGTGLAPFRGFLQER----LALKQSGVELGNSVLFFGCRNRNMDY 514
Query: 545 LYKEEKEKALADGSIEQ 595
+Y++E + + +G++ +
Sbjct: 515 IYEDELQNFIQEGALSE 531
>03_06_0206 -
32353308-32353566,32353784-32354024,32354408-32354627,
32354981-32355316,32355632-32355688,32355787-32355810
Length = 378
Score = 58.0 bits (134), Expect = 6e-09
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Frame = +2
Query: 185 RFYSISSSPLAHPH--RIHITCA--VVVYRTQNG-QGPMHYGVCSTYLQNLKPEDEALVF 349
R YSI+S+ R C V Y + G + P GVCS +L N KP D+ V
Sbjct: 153 RLYSIASTRYGDSFDGRTTSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKVKVT 212
Query: 350 IRRAPSFHMPK-DLSAPLILVGPGSGIAPFRGFWHHRKHQIKNLIPNKQKPGPVWLFFGC 526
+P+ D +A I++ G+G+APFRG+ + +P + G WLF G
Sbjct: 213 GPSGKIMLLPEEDPNATHIMIATGTGVAPFRGY---LRRMFMEDVPKYRFGGLAWLFLGV 269
Query: 527 RNRGMDLYKEE 559
N LY EE
Sbjct: 270 ANTDSLLYDEE 280
>07_01_0347 -
2509229-2509487,2509682-2509922,2510292-2510511,
2510943-2511278,2512047-2512103,2512187-2512210
Length = 378
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +2
Query: 251 VVYRTQNG-QGPMHYGVCSTYLQNLKPEDEALVFIRRAPSFHMPKD-LSAPLILVGPGSG 424
V Y + G + P G+CS +L + KP D+ + +P+D +A I++ G+G
Sbjct: 179 VYYDPETGKEDPTKKGICSNFLCDSKPGDKVQITGPSGKIMLLPEDDPNATHIMIATGTG 238
Query: 425 IAPFRGFWHHRKHQIKNLIPNKQKPGPVWLFFGCRNRGMDLYKEE 559
+AP+RG+ + +P+ + G WLF G N LY EE
Sbjct: 239 VAPYRGY---LRRMFMEDVPSFKFGGLAWLFLGVANTDSLLYDEE 280
>02_05_0508 -
29623173-29623301,29623410-29623575,29623691-29623794,
29623888-29624004,29624315-29624371,29624475-29624519,
29624610-29624720,29624788-29624861,29624967-29625060,
29625744-29625797,29626040-29626123,29626244-29626311,
29626400-29626588,29627193-29627305,29627525-29627697,
29628444-29628533
Length = 555
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 218 ALVVMKIWSRTSAVTMVVEPLAKMLEVDMKGTALVL 111
+++ +K WSR A T + +P M VD+KG A L
Sbjct: 424 SMMTVKRWSRGPAATQIGKPAVHMATVDLKGKAFEL 459
>12_02_0133 -
14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 417 PGPTRISGADKSLGIWKLGARLMKTRASSSGFRFC 313
PG T +S A+KS GI GA+ + + +FC
Sbjct: 573 PGSTTVSSAEKSSGILGSGAQRKRCNEAGHSTQFC 607
>06_02_0176 +
12637287-12637376,12638108-12638280,12638631-12638743,
12639125-12639313,12639397-12639464,12639601-12639684,
12639791-12639844,12640445-12640525,12640615-12640708,
12640830-12640903,12640976-12641086,12641299-12641355,
12641458-12641562,12641656-12641772,12641900-12642003,
12642229-12642394,12642513-12642641
Length = 602
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 218 ALVVMKIWSRTSAVTMVVEPLAKMLEVDMKG 126
+++ +K WSR A + + +P M +D+KG
Sbjct: 471 SMMTVKRWSRGPAASQIGKPAVHMASIDLKG 501
>02_05_0114 + 25958834-25961296
Length = 820
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3
Query: 342 RASSSGFRFCRYVEHTP*CIGPCPFCVL*TTTAHVM*IL*GCASGDEDM 196
R S F++CR++ P + CPF VL T +A V C+S DE +
Sbjct: 5 RQSKYVFQWCRHLRIPPLGLSSCPFSVL-TASASVQ---SDCSSDDEKL 49
>10_01_0078 -
1012031-1012084,1012998-1013105,1013610-1013661,
1013926-1016603
Length = 963
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 64 KQIRRLEASPLSTLGRSTSAVPFMSTSSIFASGSTTIVTAEVLLHIF 204
+Q R +A L T+ +S P MST+SI + I E LH+F
Sbjct: 445 EQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLF 491
>05_05_0042 - 21798255-21798871,21799400-21799777,21799861-21800820,
21800918-21800957,21801471-21801766,21802696-21802774,
21803013-21803100,21803189-21803273,21803364-21803625,
21803720-21805027,21806187-21806393,21807288-21807519,
21808267-21808353,21808427-21808735,21808879-21808957,
21809788-21809867,21809952-21810029,21810744-21810831,
21811102-21811241,21811342-21811415,21812043-21812125,
21812403-21812516,21813975-21814136,21814377-21814641
Length = 2036
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 194 SISSSPLAHPHRIHITC-AVVVYRTQNGQGPMHYGVCSTYLQNLKP 328
SIS ++ H +H+TC A ++ R G+G S+YL+ P
Sbjct: 1805 SISLVAISQDHSLHLTCQADLLTRPTPGEGNQTSSGPSSYLEGFTP 1850
>11_06_0197 +
21149453-21149630,21149930-21149996,21150142-21150244,
21150901-21150971,21151091-21151154,21151239-21151304,
21151416-21151463,21151544-21151606,21151680-21151736,
21151884-21151950,21151969-21152042,21152176-21152244,
21152323-21152414,21152782-21152860,21153233-21153398,
21153826-21153950,21154089-21154351,21154473-21154569,
21154659-21154820,21154904-21155008,21155935-21156180
Length = 753
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 397 AYSCRPRLWYSAVQRILASQKASDQEFDTEQTKTRSCLVVLR 522
+++C RL+ A + + + AS EF+ +QT R ++ LR
Sbjct: 485 SWACIRRLYRHATESAILAFSASLSEFELDQTTIRKMVMELR 526
>10_07_0056 +
12451510-12451554,12453099-12453149,12453754-12453804,
12453879-12453944,12454011-12454072,12454459-12454537,
12454618-12454722,12454824-12454934,12455017-12455154,
12455298-12455399,12455400-12455474,12455574-12455694,
12455768-12455922,12456004-12456078,12456160-12456363,
12457105-12457221
Length = 518
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 356 RAP-SFHMPKDLSAPLILVGPGSGIAPFRGFWHHR 457
+AP +F+ + L A I+V PGSG G WH R
Sbjct: 454 KAPDAFYALRLLEATGIVVVPGSGFGQVPGTWHIR 488
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,921,684
Number of Sequences: 37544
Number of extensions: 395404
Number of successful extensions: 1039
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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