Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5111
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...   214   5e-58
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   3.1  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   3.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score =  214 bits (523), Expect = 5e-58
 Identities = 101/196 (51%), Positives = 132/196 (67%)
 Frame = +2

Query: 17   TDQNDAAQLKELAIDSNKYDDWRHLHYPHLAEVLAQFPSCRXXXXXXXXXXXXXXXRFYS 196
            T+  + AQL  LA D   Y+DWRH  +P+L EVL +FPS R               RFYS
Sbjct: 841  TNPKEQAQLNLLASDPAVYEDWRHWKFPNLVEVLDEFPSVRPFAPLLLLHLTPLQPRFYS 900

Query: 197  ISSSPLAHPHRIHITCAVVVYRTQNGQGPMHYGVCSTYLQNLKPEDEALVFIRRAPSFHM 376
            ISSSP  H  +IH+T AVV Y+TQ+G GP+HYGVCS YL+ +   +   VF+R AP+F+M
Sbjct: 901  ISSSPDVHQGQIHLTVAVVQYKTQDGFGPIHYGVCSNYLREISDGEPLYVFVRSAPNFYM 960

Query: 377  PKDLSAPLILVGPGSGIAPFRGFWHHRKHQIKNLIPNKQKPGPVWLFFGCRNRGMDLYKE 556
            P +  AP+ILVGPG+GIAPFRGFWHHR  +IK   P+ +  G VWLFFGCR R +DLY++
Sbjct: 961  PSEPKAPMILVGPGTGIAPFRGFWHHRLAEIKRR-PDLEY-GKVWLFFGCRQRNLDLYRQ 1018

Query: 557  EKEKALADGSIEQSFL 604
            EKE+ +  G +++ FL
Sbjct: 1019 EKEEMVELGVLDKIFL 1034



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 579  MGVLSKVFLALS 614
            +GVL K+FLALS
Sbjct: 1026 LGVLDKIFLALS 1037


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 209 VMKIWSRTSAVTMVVEPLAKMLEVDMKGTA 120
           VMK         + VEP+ KM+EV   G A
Sbjct: 73  VMKRIEMLKGTELYVEPVYKMIEVVHAGNA 102


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 209 VMKIWSRTSAVTMVVEPLAKMLEVDMKGTA 120
           VMK         + VEP+ KM+EV   G A
Sbjct: 73  VMKRIEMLKGTELYVEPVYKMIEVVHAGNA 102


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 402 ISGADKSLGIWKLGARL 352
           I+G+   + IW LG+RL
Sbjct: 670 IAGSQCFINIWLLGSRL 686


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 403 SCRPRLWYSAVQRILASQKASDQ 471
           SC P ++   VQR+ A   A DQ
Sbjct: 72  SCGPNVYNRGVQRLEAMLFAVDQ 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,002
Number of Sequences: 438
Number of extensions: 3879
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)