Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5095
         (659 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    30   0.023
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    30   0.023
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   0.85 
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    24   1.1  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    24   1.1  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   4.5  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 29.9 bits (64), Expect = 0.023
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 208 RSPLSEFPKAKHNIINKYNNLAM 140
           R  L EFP+ KH +I  Y NL+M
Sbjct: 271 RDVLDEFPQPKHMLIEAYTNLSM 293


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 29.9 bits (64), Expect = 0.023
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 208 RSPLSEFPKAKHNIINKYNNLAM 140
           R  L EFP+ KH +I  Y NL+M
Sbjct: 271 RDVLDEFPQPKHMLIEAYTNLSM 293


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 20/65 (30%), Positives = 25/65 (38%)
 Frame = +3

Query: 183 FGNSDKGDLKFYQEKNFHEPLDFTDDDIKAIANLSDLDHFKAVLNEILIPRVVGTPNHEK 362
           F     GD     EK    P++  DD IKAI + SD       + E L        NH K
Sbjct: 47  FDKFRSGDFSLKDEKRSGRPVEVDDDLIKAIID-SDRHSTTREIAEKLHVSHTCIENHLK 105

Query: 363 VGNYI 377
              Y+
Sbjct: 106 QLGYV 110


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 18  YTKTFKLTLKLYETLSS 68
           YTKTFK+ +   ETL S
Sbjct: 57  YTKTFKMNVPFEETLPS 73


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 18  YTKTFKLTLKLYETLSS 68
           YTKTFK+ +   ETL S
Sbjct: 59  YTKTFKMNVPFEETLPS 75


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 129 SLTNMAKLLYLFMMLCFAFGNSDK 200
           +LTN  K++Y +  + + FG+ +K
Sbjct: 24  NLTNSLKVIYEWKYIDYDFGSDEK 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,391
Number of Sequences: 438
Number of extensions: 3618
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)