Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5088
(461 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132904-20|CAE17963.1| 237|Caenorhabditis elegans Hypothetical... 31 0.40
Z37092-6|CAE46667.1| 334|Caenorhabditis elegans Hypothetical pr... 30 0.93
Z37092-5|CAA85456.1| 336|Caenorhabditis elegans Hypothetical pr... 30 0.93
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 28 2.8
Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical p... 27 4.9
Z46266-15|CAA86420.1| 956|Caenorhabditis elegans Hypothetical p... 27 4.9
Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical p... 27 4.9
Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical p... 27 4.9
Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical p... 27 4.9
Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical p... 27 4.9
Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical p... 27 4.9
Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z46266-8|CAJ30221.1| 826|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z37979-6|CAA86038.1| 956|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical pr... 27 4.9
U41277-5|AAA82476.2| 230|Caenorhabditis elegans Hypothetical pr... 27 6.5
AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein. 27 6.5
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL132904-20|CAE17963.1| 237|Caenorhabditis elegans Hypothetical
protein Y111B2A.27 protein.
Length = 237
Score = 31.1 bits (67), Expect = 0.40
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 156 HSFHYAKANAHLNP*ITPDYSL*TTHTLGQEGQVPGRYPGCIDDIP 19
+SFHY A+ HL D S +T G +G Y GC+D P
Sbjct: 54 NSFHYDAASRHL---FMADISSLVKNTSGDDGAPIASYAGCLDYAP 96
>Z37092-6|CAE46667.1| 334|Caenorhabditis elegans Hypothetical
protein F44F4.5b protein.
Length = 334
Score = 29.9 bits (64), Expect = 0.93
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -1
Query: 194 IMSSLCACY*VVLTVFTTRKPTPILTHESPPITLFRQPIPWARKVKYLGVTLDASMTFR 18
I+S + A + LT+++T T L PI+++ + WA V + V+L A + +R
Sbjct: 242 IISYIAASQFLGLTLYSTMVLTLRLHKSMIPISIYHNMVWWAYTVPFAAVSLPALLIYR 300
>Z37092-5|CAA85456.1| 336|Caenorhabditis elegans Hypothetical
protein F44F4.5a protein.
Length = 336
Score = 29.9 bits (64), Expect = 0.93
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -1
Query: 194 IMSSLCACY*VVLTVFTTRKPTPILTHESPPITLFRQPIPWARKVKYLGVTLDASMTFR 18
I+S + A + LT+++T T L PI+++ + WA V + V+L A + +R
Sbjct: 244 IISYIAASQFLGLTLYSTMVLTLRLHKSMIPISIYHNMVWWAYTVPFAAVSLPALLIYR 302
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 83 PIPWARKVKYLGVTLDASMTFRPHIK 6
PI + + LG+ D+ +TF+PHIK
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIK 213
>Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 896 PVERMAALSIANPVFGPGPSSGYAIP 921
>Z46266-15|CAA86420.1| 956|Caenorhabditis elegans Hypothetical
protein ZK899.8f protein.
Length = 956
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 764 PVERMAALSIANPVFGPGPSSGYAIP 789
>Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 856 PVERMAALSIANPVFGPGPSSGYAIP 881
>Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 945 PVERMAALSIANPVFGPGPSSGYAIP 970
>Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 1067 PVERMAALSIANPVFGPGPSSGYAIP 1092
>Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 978 PVERMAALSIANPVFGPGPSSGYAIP 1003
>Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 1015 PVERMAALSIANPVFGPGPSSGYAIP 1040
>Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical
protein ZK899.8j protein.
Length = 790
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 598 PVERMAALSIANPVFGPGPSSGYAIP 623
>Z46266-8|CAJ30221.1| 826|Caenorhabditis elegans Hypothetical
protein ZK899.8i protein.
Length = 826
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 634 PVERMAALSIANPVFGPGPSSGYAIP 659
>Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical
protein ZK899.8g protein.
Length = 787
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 595 PVERMAALSIANPVFGPGPSSGYAIP 620
>Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 896 PVERMAALSIANPVFGPGPSSGYAIP 921
>Z37979-6|CAA86038.1| 956|Caenorhabditis elegans Hypothetical
protein ZK899.8f protein.
Length = 956
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 764 PVERMAALSIANPVFGPGPSSGYAIP 789
>Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 856 PVERMAALSIANPVFGPGPSSGYAIP 881
>Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical protein
ZK899.8d protein.
Length = 1137
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 945 PVERMAALSIANPVFGPGPSSGYAIP 970
>Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical protein
ZK899.8c protein.
Length = 1259
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 1067 PVERMAALSIANPVFGPGPSSGYAIP 1092
>Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical protein
ZK899.8b protein.
Length = 1170
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 978 PVERMAALSIANPVFGPGPSSGYAIP 1003
>Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical protein
ZK899.8a protein.
Length = 1207
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 1015 PVERMAALSIANPVFGPGPSSGYAIP 1040
>Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical protein
ZK899.8a protein.
Length = 1207
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 1015 PVERMAALSIANPVFGPGPSSGYAIP 1040
>U41277-5|AAA82476.2| 230|Caenorhabditis elegans Hypothetical
protein C06E4.7 protein.
Length = 230
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 349 ISRRMADLRCRCL-WAPVTTKHQVGCELV 432
I+ +A+ +C C W +T+ +GCELV
Sbjct: 26 INLSVAERQCICASWEKASTQSDIGCELV 54
>AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.
Length = 1120
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 118 PMNHPRLLSLDNPYPGPGRSSTWALP 41
P+ LS+ NP GPG SS +A+P
Sbjct: 945 PVERMAALSIANPCFGPGPSSGYAIP 970
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 435 VDELTAHLVFSGYWSPQTSTT 373
+D LTA L F G W P S T
Sbjct: 198 IDHLTATLPFGGLWIPNRSQT 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,076,349
Number of Sequences: 27780
Number of extensions: 258928
Number of successful extensions: 501
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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