Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5087
(709 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0102 + 8414109-8414505,8416172-8416227 32 0.51
08_01_0397 - 3509186-3510291,3510322-3512335 28 1.1
07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993 30 2.1
03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169 30 2.1
01_06_1222 - 35499069-35499287,35500319-35501734 30 2.1
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314... 29 2.7
07_01_0303 - 2171796-2172611,2173133-2174062,2174659-2175132,217... 29 2.7
02_03_0167 - 15923872-15925683 29 2.7
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 29 2.7
11_01_0538 + 4265540-4265896 29 3.6
10_08_0738 - 20212220-20212282,20212387-20212593,20212690-202128... 29 3.6
04_04_0512 + 25806599-25808080 29 3.6
02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217... 29 3.6
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 29 3.6
11_01_0344 + 2558950-2558971,2560389-2560465,2560543-2560833 29 4.8
10_01_0270 - 2876907-2877547,2877838-2878012 29 4.8
06_02_0349 + 15032131-15033117 29 4.8
04_03_0241 - 13243938-13244453,13244538-13246334 29 4.8
04_01_0471 + 6099768-6100094,6100384-6100416 28 6.3
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880... 28 6.3
>05_03_0102 + 8414109-8414505,8416172-8416227
Length = 150
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 427 TCDRRCGDPRRNMRT-HTSREHGLRHDRNVRR 335
TC++R RRN+ H R HG HD N R+
Sbjct: 107 TCEKRQAQQRRNIAAAHAMRPHGRGHDLNFRK 138
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 27.9 bits (59), Expect(2) = 1.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 460 SRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHGLRHDRNVR-RQLESQRGARLE 302
SRHHH R DR RR+ RE +R R ++ E +R R E
Sbjct: 39 SRHHHREDRDDDRDRDRDRERRHREKERDREERKAREREEREKEKERERARRRE 92
Score = 21.4 bits (43), Expect(2) = 1.1
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = -1
Query: 232 RREQQDRHVESKGLRESVQEQHDSI 158
RRE++DR S+ + +E+ + +
Sbjct: 90 RREERDREERSRRREAAAEEEEEDV 114
>07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993
Length = 678
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 409 GDPRRNMRTHTSREHGLRHDRNVRRQLESQRGARLEHVAQG*SVGLLAKHVYTKNVPRGR 230
G+P H ++ ++RNVR +S G L +A S LAKH T+ V GR
Sbjct: 59 GEPNIPENDHVYKKIEKAYNRNVRDNSKSTGGVTLPSIAS--SEERLAKHNNTEKVTNGR 116
>03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169
Length = 515
Score = 29.9 bits (64), Expect = 2.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 101 WEDTAWPWPSSITPPWQIAK 42
W+D WPSS + PW++ K
Sbjct: 227 WQDVLLLWPSSSSSPWELTK 246
>01_06_1222 - 35499069-35499287,35500319-35501734
Length = 544
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 267 ASSPTLQPCATCSSRAPRCDSNCRRTFRSCRRPCSR 374
+S+P PC C++ + + C ++ S RRPC+R
Sbjct: 7 SSTPLFSPC--CAAATAKLGAACPSSYGSRRRPCTR 40
>07_01_0408 -
3137705-3138017,3139361-3139371,3140693-3140770,
3141105-3141206,3141309-3141380,3141484-3141558
Length = 216
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 169 AAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAA 324
AA + H P+I+ A P AA + +H PV++ +P A AA
Sbjct: 9 AAAIAPHLVPVIRGATPFAPAAATAAAISLHLVPVIRGATPFSSAVAAAAAA 60
>07_01_0303 -
2171796-2172611,2173133-2174062,2174659-2175132,
2175569-2175609,2176298-2176337
Length = 766
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 335 PSNIPIMSKTMLPRSMSSHIPSRIP------TPAITSPNTKPVMVMS*KAN 469
P+NIP+ +P M +++P+ +P PA N P MV S AN
Sbjct: 576 PANIPVNLPANVPPEMPANLPANVPPEMLASLPANLPANVPPEMVASLPAN 626
>02_03_0167 - 15923872-15925683
Length = 603
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -2
Query: 417 AGVGILDGI*ELILRGSMVFDMIGMFDGNWNRSVVHDWSMLHRAEVL--DYWRSMYIRRM 244
AG+ +L+ + +++RGS + +FDG N+SVV W+ L +L DY +
Sbjct: 187 AGLPVLNSVLTMLVRGSHLDAARLLFDGICNKSVV-TWTALASGYLLRGDYLEVFDLFNR 245
Query: 243 FHGGGVN 223
G G N
Sbjct: 246 MRGVGKN 252
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 154 PVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAP 306
P ++ AAP AAP A AAPVE +S A SP + P
Sbjct: 353 PAITEAAPATAEAAPAAATATAAPPAAPVEETSTEAAPAEPTPLSPYTNYP 403
>11_01_0538 + 4265540-4265896
Length = 118
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 261 CFASSPTL-QPCATCSSRAPRCDSNCRRTFR 350
C S TL +P A C SR P C C+ FR
Sbjct: 58 CPPGSATLCRPLAGCRSRIPACRIKCKSVFR 88
>10_08_0738 -
20212220-20212282,20212387-20212593,20212690-20212819,
20212919-20213089,20213311-20213433,20213517-20213618,
20214123-20214880
Length = 517
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 98 EDTAWPWPSSITPPWQIAKIEQTTAIL 18
E WP P S PP ++ K EQT ++
Sbjct: 136 EAARWPPPPSFQPPIEVIKAEQTAPLI 162
>04_04_0512 + 25806599-25808080
Length = 493
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/47 (21%), Positives = 24/47 (51%)
Frame = +1
Query: 325 IPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKG 465
+P V +S+ + +HA ++ P GD +++H++ + + G
Sbjct: 392 LPEYVSNSEELSNHATFNHKVEEDSSSPAAGDRENEHDSSNSATIDG 438
>02_04_0451 +
23021139-23021269,23021366-23021498,23021594-23021789,
23023376-23023737,23024049-23024363
Length = 378
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 PKHSPP*RAFSSSNGTLYPSIESCCSCTDSRSPFDXXXXXXXXXXPRGTFFVYT-CF 266
P+ P R FSS N L P S SR PRG FF ++ C+
Sbjct: 322 PEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY 378
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/92 (23%), Positives = 30/92 (32%)
Frame = +1
Query: 70 DEGHGHAVSSQSIVRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPVVHAAPVEHS 249
DE H + R PS TP L + Q AGP ++ A
Sbjct: 309 DEVKSHLQKYRLHTRRPMPSPAPPTAATPQLVVLGGIWVPPEYATQAAGPAIYGAHPATQ 368
Query: 250 SYIHASPVVQHFSPVQHAPVVHHAAIPIAVEH 345
+ A+ Q + H + HH A V H
Sbjct: 369 PHYTAAVAAQEYYHHHHHHLQHHPAAAALVHH 400
>11_01_0344 + 2558950-2558971,2560389-2560465,2560543-2560833
Length = 129
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = -2
Query: 279 LDYWRSMYIRRMFHGGGV----NNRTGMLNQRGCVSQYRSSMTQYWGIMCRCLMRR 124
LD+WR +RR+ G V G+L Q G + + Q G +CRCL R
Sbjct: 32 LDWWRCARVRRLSVRGDVADADGGEDGVLGQAGGARLHGAIRVQD-GEVCRCLQLR 86
>10_01_0270 - 2876907-2877547,2877838-2878012
Length = 271
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 163 SHAAPVLTHAAP-LIQHAGPVVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAV 339
S AP H P H P V++ P +Y H +PV + P P+ H A V
Sbjct: 174 SPPAPAAYHKPPPSYTHPAPPVYSYPTP--AYSHPTPVYKQPLPTPSPPIYHPPAEEKKV 231
Query: 340 EHSDHVE 360
D E
Sbjct: 232 AMQDDAE 238
>06_02_0349 + 15032131-15033117
Length = 328
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +3
Query: 192 SPFDXXXXXXXXXXPRGTFFVYTCFASSPTLQPC-ATCSSRAPRCDSNCRRTFRSCR 359
+PF PR + + C ++P A C RCDS C CR
Sbjct: 105 APFSLDTSTRFSLSPRNDYLFFDCDEERVIVEPRPAVCDRYPERCDSTCDSAGYLCR 161
>04_03_0241 - 13243938-13244453,13244538-13246334
Length = 770
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/76 (32%), Positives = 27/76 (35%)
Frame = -1
Query: 436 RVGTCDRRCGDPRRNMRTHTSREHGLRHDRNVRRQLESQRGARLEHVAQG*SVGLLAKHV 257
RVG DRR D R SRE D N R RG R E + G +
Sbjct: 295 RVGRDDRRSRDNRGKGGRDRSREERNGRDENDDRGGRDDRGDRDERGERSVRDGRRGRGG 354
Query: 256 YTKNVPRGRREQQDRH 209
P RRE D H
Sbjct: 355 RRNERPWRRREYNDDH 370
>04_01_0471 + 6099768-6100094,6100384-6100416
Length = 119
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 33 LLDFGYLPRWCYRRGPRPC-CVFPKH 107
+L+F +LPR RRG R C V P H
Sbjct: 67 VLNFAFLPRTSLRRGARACRIVVPHH 92
>03_05_0825 -
27986393-27986767,27987541-27987625,27987936-27988036,
27988144-27988227,27988868-27988939,27989203-27989319,
27989386-27989526,27989951-27990122,27990324-27990372,
27990773-27990821,27991240-27991270,27991301-27991371
Length = 448
Score = 28.3 bits (60), Expect = 6.3
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Frame = -1
Query: 400 RRNMRTHTSREHGLRHDRNVRRQLESQRGARLEHVAQG*S-VGLLAKHVYTKNV---PRG 233
RR T ++ ++ NV RQLE + AR G S + + K + T P+
Sbjct: 333 RRAELTQFQKQVEEQYMSNVERQLERMQNARNARRGNGPSNMQEMDKELDTHRAEHGPKT 392
Query: 232 RREQQDRHVESKGLRESVQEQH--DSILGYNVPLLDEKAR 119
RR + + + + + E D +LG N P+ DE+ +
Sbjct: 393 RRVLEGGNDDEDDMDDMAVEDELMDEVLGINEPISDEQTK 432
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.131 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,348,798
Number of Sequences: 37544
Number of extensions: 495752
Number of successful extensions: 1834
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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