Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5073
         (557 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1253 + 25201629-25202084,25203264-25203399,25204564-252047...    28   5.8  
06_01_0503 - 3596664-3596837,3597647-3598069,3598362-3598595,359...    27   7.7  
01_01_0499 - 3675303-3675484,3676888-3676982,3677046-3677096,367...    27   7.7  

>07_03_1253 +
           25201629-25202084,25203264-25203399,25204564-25204700,
           25205439-25206121,25206767-25206911,25207669-25207701
          Length = 529

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 354 PGIYLRCRSEEFWDWPWNTKSIIRFSDLPI 443
           P +   CR+EEFW W        R  +LP+
Sbjct: 449 PAVAAACRNEEFWVWHVPADHKARKMELPL 478


>06_01_0503 -
           3596664-3596837,3597647-3598069,3598362-3598595,
           3598720-3598993,3599390-3599523,3599572-3599634,
           3599759-3599846,3599919-3599989,3600898-3601010,
           3601836-3602004,3602580-3602671,3602819-3603295,
           3603736-3604090
          Length = 888

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 188 KYSFDYSVKDPHTGDEKEHWETRDGD 111
           K + DY++ + +T DE EH E  DG+
Sbjct: 143 KATDDYALNNLNTSDEAEHMEPTDGN 168


>01_01_0499 -
           3675303-3675484,3676888-3676982,3677046-3677096,
           3677191-3677270,3677423-3677593,3677836-3677937,
           3678092-3678244,3678392-3678523,3678702-3678788,
           3678987-3679126,3679246-3679660
          Length = 535

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 176 DYSVKDPHTGDEKEHWETRDGDKVKGKASL 87
           D S  DP+ GD   HW   +GD+   K  L
Sbjct: 119 DPSTPDPNGGDTPLHWAAYNGDRELAKLLL 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,277,731
Number of Sequences: 37544
Number of extensions: 283313
Number of successful extensions: 410
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)