Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5070
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical pr...    31   0.69 
Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical pr...    31   0.69 
Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical ...    28   6.4  

>Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical
           protein F40F9.6b protein.
          Length = 910

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 84  LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 233
           L   T+RV++ +E   +    YVP   L  LP EL+     +G+ EA+++ G
Sbjct: 81  LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 131


>Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical
           protein F40F9.6a protein.
          Length = 924

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 84  LQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 233
           L   T+RV++ +E   +    YVP   L  LP EL+     +G+ EA+++ G
Sbjct: 95  LADSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 145


>Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical
          protein T22C1.8 protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 9  EDDESADPRLAKDPAYEMFDKVDK 80
          +DD+ A  RLAK P+ E  D+ DK
Sbjct: 12 QDDQQASRRLAKKPSDEKVDEKDK 35


>AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical
           protein Y6B3B.9 protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 293 DETVFALDPQWFRELDLLLPALNDFSLIF 207
           D  VF+ D +W++ LD LLP   +FS  F
Sbjct: 331 DADVFS-DEEWYKVLDHLLPVAKNFSTEF 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,259,668
Number of Sequences: 27780
Number of extensions: 200554
Number of successful extensions: 629
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)