Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5067
         (365 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49793-1|AAB57632.1|  877|Drosophila melanogaster transcriptiona...    28   3.3  
BT001565-1|AAN71320.1|  877|Drosophila melanogaster RE16782p pro...    28   3.3  
AE014297-993|AAF54419.2|  877|Drosophila melanogaster CG9495-PA ...    28   3.3  
AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p pro...    27   7.5  
AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA...    27   7.5  

>U49793-1|AAB57632.1|  877|Drosophila melanogaster transcriptional
           repressor protein protein.
          Length = 877

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 54  PLGFRTFSSSWPKASCRI 1
           PLGFR  +SSWP   C+I
Sbjct: 273 PLGFRMNASSWPGYLCKI 290


>BT001565-1|AAN71320.1|  877|Drosophila melanogaster RE16782p
           protein.
          Length = 877

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 54  PLGFRTFSSSWPKASCRI 1
           PLGFR  +SSWP   C+I
Sbjct: 273 PLGFRMNASSWPGYLCKI 290


>AE014297-993|AAF54419.2|  877|Drosophila melanogaster CG9495-PA
           protein.
          Length = 877

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 54  PLGFRTFSSSWPKASCRI 1
           PLGFR  +SSWP   C+I
Sbjct: 273 PLGFRMNASSWPGYLCKI 290


>AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p
           protein.
          Length = 157

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = -3

Query: 363 IVIRSQYSHSVCPTLQAETHYCFTAEIGGAVVPTRADSQEVLPPVITQ 220
           +++R QY   VC  +   T  C           T    Q V PPV +Q
Sbjct: 42  LLLRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVASQ 89


>AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA
           protein.
          Length = 157

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = -3

Query: 363 IVIRSQYSHSVCPTLQAETHYCFTAEIGGAVVPTRADSQEVLPPVITQ 220
           +++R QY   VC  +   T  C           T    Q V PPV +Q
Sbjct: 42  LLLRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVASQ 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,941,243
Number of Sequences: 53049
Number of extensions: 334141
Number of successful extensions: 821
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)