BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5065
(439 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p pro... 202 2e-52
AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA... 202 2e-52
M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.me... 51 6e-07
BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p pro... 51 6e-07
AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11... 51 6e-07
AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11... 51 6e-07
AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB ... 51 6e-07
AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical kn... 48 4e-06
AY070514-1|AAL47985.1| 355|Drosophila melanogaster GH19857p pro... 31 0.91
AE013599-2996|AAF57482.1| 355|Drosophila melanogaster CG11200-P... 31 0.91
AE013599-2995|AAF57481.1| 355|Drosophila melanogaster CG11200-P... 31 0.91
L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein. 28 4.8
AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA... 28 4.8
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 28 6.4
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 28 6.4
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 28 6.4
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 28 6.4
AY119520-1|AAM50174.1| 667|Drosophila melanogaster GH14596p pro... 27 8.4
AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p pro... 27 8.4
AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown prot... 27 8.4
AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA p... 27 8.4
AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-P... 27 8.4
AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA ... 27 8.4
>AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p
protein.
Length = 143
Score = 202 bits (493), Expect = 2e-52
Identities = 92/102 (90%), Positives = 100/102 (98%), Gaps = 1/102 (0%)
Frame = +1
Query: 28 PR-IRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 204
PR +RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQPN
Sbjct: 4 PRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 63
Query: 205 SAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF 330
SAIRKCVRVQLIKNGKK+TAFVPRDG LN+IEENDEVLVAGF
Sbjct: 64 SAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGF 105
Score = 57.6 bits (133), Expect = 7e-09
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +3
Query: 348 AVGDIPGVRFKGVKVANVSLLPLYKEKKER 437
AVGDIPGVRFK VKVANVSLL LYKEKKER
Sbjct: 111 AVGDIPGVRFKVVKVANVSLLALYKEKKER 140
>AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA
protein.
Length = 143
Score = 202 bits (493), Expect = 2e-52
Identities = 92/102 (90%), Positives = 100/102 (98%), Gaps = 1/102 (0%)
Frame = +1
Query: 28 PR-IRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 204
PR +RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQPN
Sbjct: 4 PRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 63
Query: 205 SAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF 330
SAIRKCVRVQLIKNGKK+TAFVPRDG LN+IEENDEVLVAGF
Sbjct: 64 SAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGF 105
Score = 57.6 bits (133), Expect = 7e-09
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +3
Query: 348 AVGDIPGVRFKGVKVANVSLLPLYKEKKER 437
AVGDIPGVRFK VKVANVSLL LYKEKKER
Sbjct: 111 AVGDIPGVRFKVVKVANVSLLALYKEKKER 140
>M19494-1|AAA28935.1| 140|Drosophila melanogaster protein (
D.melanogaster tko (technical knockout) locus mRNA
encoding tko gene product,complete cds. ).
Length = 140
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 106 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 285
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 286 LNHIEENDEVL 318
++++E++ VL
Sbjct: 99 GHNLQEHNIVL 109
>BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p
protein.
Length = 140
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 106 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 285
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 286 LNHIEENDEVL 318
++++E++ VL
Sbjct: 99 GHNLQEHNIVL 109
>AL133505-2|CAB65841.1| 140|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 140
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 106 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 285
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 286 LNHIEENDEVL 318
++++E++ VL
Sbjct: 99 GHNLQEHNIVL 109
>AL133505-1|CAB63528.1| 154|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 154
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 106 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 285
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 286 LNHIEENDEVL 318
++++E++ VL
Sbjct: 113 GHNLQEHNIVL 123
>AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB
protein.
Length = 140
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 106 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 285
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 286 LNHIEENDEVL 318
++++E++ VL
Sbjct: 99 GHNLQEHNIVL 109
>AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical
knockout protein protein.
Length = 140
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +1
Query: 106 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 285
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+ GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR-HSTGKEMVAYIP--GI 98
Query: 286 LNHIEENDEVL 318
++++E++ VL
Sbjct: 99 GHNLQEHNIVL 109
>AY070514-1|AAL47985.1| 355|Drosophila melanogaster GH19857p
protein.
Length = 355
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 344 DLYDRNPATSTSSFSSMWFRQPSRGTNAVTF 252
DL++ + TS F ++F+ P RG+ V F
Sbjct: 271 DLFEHSATTSVPIFKKLFFKTPERGSRTVVF 301
>AE013599-2996|AAF57482.1| 355|Drosophila melanogaster CG11200-PB,
isoform B protein.
Length = 355
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 344 DLYDRNPATSTSSFSSMWFRQPSRGTNAVTF 252
DL++ + TS F ++F+ P RG+ V F
Sbjct: 271 DLFEHSATTSVPIFKKLFFKTPERGSRTVVF 301
>AE013599-2995|AAF57481.1| 355|Drosophila melanogaster CG11200-PA,
isoform A protein.
Length = 355
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 344 DLYDRNPATSTSSFSSMWFRQPSRGTNAVTF 252
DL++ + TS F ++F+ P RG+ V F
Sbjct: 271 DLFEHSATTSVPIFKKLFFKTPERGSRTVVF 301
>L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein.
Length = 1429
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Frame = -3
Query: 344 DLYDRNPATSTSSFSS--MWFRQPS---RGTNAVTFFPFLMSCTRTHLRMAELGCLASTP 180
DL D P TS S S PS RG +A T P + R + RM L ++
Sbjct: 174 DLGDAPPGTSNSKDDSGEETLASPSNGGRGLSATTTLPKISK--RANERMLRLSTYVAST 231
Query: 179 TFSRTMPFA*DAPPKGLAFH 120
+ T+P PP G ++
Sbjct: 232 SKRETIPLPPSLPPNGADYY 251
>AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA
protein.
Length = 358
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 133 PFGGASHAKGIVLEKVGVEAK--QPNSAIRKCVRVQLIK 243
PFG + +VLE+ G K Q IRKCV + +K
Sbjct: 123 PFGNVEYVLKVVLERRGTHNKCFQQRLVIRKCVELADLK 161
>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 protein.
Length = 1228
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 161 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 60
PF PP VP++A L L R +RRW
Sbjct: 910 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 943
>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p protein.
Length = 1241
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 161 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 60
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 protein.
Length = 1241
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 161 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 60
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
protein.
Length = 1241
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 161 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 60
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AY119520-1|AAM50174.1| 667|Drosophila melanogaster GH14596p
protein.
Length = 667
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 114 YEMEG*PFRWCISRKGHRPRESWCRS*AAQLC 209
YE+E P W + HR R+++C +LC
Sbjct: 267 YEVEANPSLWLSTLSQHRVRDTFCSYGVIELC 298
>AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p
protein.
Length = 1427
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Frame = -3
Query: 344 DLYDRNPATSTSSFSS--MWFRQPS---RGTNAVTFFPFLMSCTRTHLRMAELGCLASTP 180
DL D P TS S S PS RG +A T P + R + RM L ++
Sbjct: 174 DLGDAPPGTSNSKDDSGEETSASPSNGGRGLSATTTLPKISK--RANERMLRLSTYVAST 231
Query: 179 TFSRTMPFA*DAPPKGLAFH 120
+ T+P PP G ++
Sbjct: 232 SKRETIPLPPSLPPNGADYY 251
>AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown protein.
Length = 1640
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 114 YEMEG*PFRWCISRKGHRPRESWCRS*AAQLC 209
YE+E P W + HR R+++C +LC
Sbjct: 1240 YEVEANPSLWLSTLSQHRVRDTFCSYGVIELC 1271
>AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA
protein.
Length = 1773
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 114 YEMEG*PFRWCISRKGHRPRESWCRS*AAQLC 209
YE+E P W + HR R+++C +LC
Sbjct: 1373 YEVEANPSLWLSTLSQHRVRDTFCSYGVIELC 1404
>AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-PA
protein.
Length = 1377
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 394 ATFTPLKRTPGMSPTAVTFTTGIPPLV 314
AT PLK TP +P T PP++
Sbjct: 1061 ATALPLKSTPSSAPPTCTLPVAAPPIL 1087
>AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA
protein.
Length = 1427
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Frame = -3
Query: 344 DLYDRNPATSTSSFSS--MWFRQPS---RGTNAVTFFPFLMSCTRTHLRMAELGCLASTP 180
DL D P TS S S PS RG +A T P + R + RM L ++
Sbjct: 174 DLGDAPPGTSNSKDDSGEETSASPSNGGRGLSATTTLPKISK--RANERMLRLSTYVAST 231
Query: 179 TFSRTMPFA*DAPPKGLAFH 120
+ T+P PP G ++
Sbjct: 232 SKRETIPLPPSLPPNGADYY 251
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,018,275
Number of Sequences: 53049
Number of extensions: 470413
Number of successful extensions: 1491
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -