Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5064
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18064-1|CAA77022.1|  890|Homo sapiens wolframin protein.              32   2.4  
BC030130-1|AAH30130.1|  890|Homo sapiens WFS1 protein protein.         32   2.4  
AF084481-1|AAC64943.1|  890|Homo sapiens transmembrane protein p...    32   2.4  
AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    31   4.2  
AK097452-1|BAC05058.1|  225|Homo sapiens protein ( Homo sapiens ...    31   4.2  
AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens ...    31   5.5  
CR541711-1|CAG46512.1|  284|Homo sapiens ICMT protein.                 30   9.6  
CR541671-1|CAG46472.1|  284|Homo sapiens ICMT protein.                 30   9.6  
BC028168-1|AAH28168.1|  284|Homo sapiens isoprenylcysteine carbo...    30   9.6  
AL031847-5|CAI19441.1|  284|Homo sapiens isoprenylcysteine carbo...    30   9.6  
AF064084-1|AAC16554.1|  284|Homo sapiens prenylcysteine carboxyl...    30   9.6  

>Y18064-1|CAA77022.1|  890|Homo sapiens wolframin protein.
          Length = 890

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 21/70 (30%), Positives = 38/70 (54%)
 Frame = +2

Query: 200 ILYSSIIYNFFAHSPLTHITVFHAYMYGYLCCHYMYCQIYFRM*SKYIQI*RLLEATVGC 379
           +LY  ++Y FF  + L +    + Y+  YL C +M+C++   +  +   +  LL A++G 
Sbjct: 506 LLYVYLLYLFFRMAQLRNFKGTYCYLVPYLVC-FMWCELSVVILLESTGL-GLLRASIGY 563

Query: 380 TCNFLFALKV 409
              FLFAL +
Sbjct: 564 FL-FLFALPI 572


>BC030130-1|AAH30130.1|  890|Homo sapiens WFS1 protein protein.
          Length = 890

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 21/70 (30%), Positives = 38/70 (54%)
 Frame = +2

Query: 200 ILYSSIIYNFFAHSPLTHITVFHAYMYGYLCCHYMYCQIYFRM*SKYIQI*RLLEATVGC 379
           +LY  ++Y FF  + L +    + Y+  YL C +M+C++   +  +   +  LL A++G 
Sbjct: 506 LLYVYLLYLFFRMAQLRNFKGTYCYLVPYLVC-FMWCELSVVILLESTGL-GLLRASIGY 563

Query: 380 TCNFLFALKV 409
              FLFAL +
Sbjct: 564 FL-FLFALPI 572


>AF084481-1|AAC64943.1|  890|Homo sapiens transmembrane protein
           protein.
          Length = 890

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 21/70 (30%), Positives = 38/70 (54%)
 Frame = +2

Query: 200 ILYSSIIYNFFAHSPLTHITVFHAYMYGYLCCHYMYCQIYFRM*SKYIQI*RLLEATVGC 379
           +LY  ++Y FF  + L +    + Y+  YL C +M+C++   +  +   +  LL A++G 
Sbjct: 506 LLYVYLLYLFFRMAQLRNFKGTYCYLVPYLVC-FMWCELSVVILLESTGL-GLLRASIGY 563

Query: 380 TCNFLFALKV 409
              FLFAL +
Sbjct: 564 FL-FLFALPI 572


>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
 Frame = +3

Query: 87  HIFYTPLSYTISSLTPLLHIFYTPLSYTISSLTPLLHI---FYTPL-SYTISSLTPLLHI 254
           H+     SYT   +   +HI      Y  S     +HI    YT + +Y    +    +I
Sbjct: 32  HMHTYVYSYTRICIHMYIHIHAYAYIYVYSYTRICIHICIFIYTHMHTYMYIHIHAYAYI 91

Query: 255 LPY-FTHICMDICVVITCIARYIFV 326
             Y +T IC+ ICV I C   YI+V
Sbjct: 92  YVYSYTRICIHICVFI-CTHAYIYV 115


>AK097452-1|BAC05058.1|  225|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40133 fis, clone TESTI2012231. ).
          Length = 225

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
 Frame = +2

Query: 65  FFAHSPLTHILYSSIIYNFFAHSPLTHILYSSIIYNFFAHSPLTHI----LYSSIIYNFF 232
           + +H+P +  ++++  ++   H+  TH  +++   +  ++   TH     L S+ ++   
Sbjct: 19  YHSHNPHSPTIHNTHTHHSHTHTIWTHHTHTTHTTHINSYKAFTHTTHTPLTSTHLHTPL 78

Query: 233 AHSPLTHITVFHAYMYGYLCCHYMY 307
            H+P THIT  H+     L  H  Y
Sbjct: 79  THTPRTHIT-HHSQTQHTLLIHQSY 102


>AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46490 fis, clone THYMU3027540. ).
          Length = 129

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
 Frame = +2

Query: 86  THI-LYSSIIYNFFAH--SPLTHI-LYSSIIYNFFAHSPLTHILYSSIIYNFFAHSPLTH 253
           TH+ +Y + +Y +  H    +THI +Y + IY   +H      +Y   +Y+ +    +T+
Sbjct: 37  THMYVYHTYMYVYHTHICMYITHICMYITHIYVCISH------IYM-YVYHAYMCMYITY 89

Query: 254 ITVFHAYM---YGYLCCHYMYCQIY 319
           + V+H YM   + Y+C +++Y  ++
Sbjct: 90  MCVYHTYMHVYHTYMCVYHIYIYMH 114



 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 249 HILPYFTHICMDICVVITCIAR-YIFV 326
           HI  Y THICM I  +  CI+  Y++V
Sbjct: 52  HICMYITHICMYITHIYVCISHIYMYV 78


>CR541711-1|CAG46512.1|  284|Homo sapiens ICMT protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 86  THILYSSIIYNFFAHSPLTHILYSSIIYNFFAHSPLTHILYSSIIYNFFA-HSPLTHITV 262
           TH L +S +Y +F H       Y SI       +P+  + Y+  ++ FF   +    I++
Sbjct: 196 THTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTVWRFFRDRTEEEEISL 255

Query: 263 FHAYMYGYL 289
            H +   YL
Sbjct: 256 IHFFGEEYL 264


>CR541671-1|CAG46472.1|  284|Homo sapiens ICMT protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 86  THILYSSIIYNFFAHSPLTHILYSSIIYNFFAHSPLTHILYSSIIYNFFA-HSPLTHITV 262
           TH L +S +Y +F H       Y SI       +P+  + Y+  ++ FF   +    I++
Sbjct: 196 THTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTVWRFFRDRTEEEEISL 255

Query: 263 FHAYMYGYL 289
            H +   YL
Sbjct: 256 IHFFGEEYL 264


>BC028168-1|AAH28168.1|  284|Homo sapiens isoprenylcysteine carboxyl
           methyltransferase protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 86  THILYSSIIYNFFAHSPLTHILYSSIIYNFFAHSPLTHILYSSIIYNFFA-HSPLTHITV 262
           TH L +S +Y +F H       Y SI       +P+  + Y+  ++ FF   +    I++
Sbjct: 196 THTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTVWRFFRDRTEEEEISL 255

Query: 263 FHAYMYGYL 289
            H +   YL
Sbjct: 256 IHFFGEEYL 264


>AL031847-5|CAI19441.1|  284|Homo sapiens isoprenylcysteine carboxyl
           methyltransferase protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 86  THILYSSIIYNFFAHSPLTHILYSSIIYNFFAHSPLTHILYSSIIYNFFA-HSPLTHITV 262
           TH L +S +Y +F H       Y SI       +P+  + Y+  ++ FF   +    I++
Sbjct: 196 THTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTVWRFFRDRTEEEEISL 255

Query: 263 FHAYMYGYL 289
            H +   YL
Sbjct: 256 IHFFGEEYL 264


>AF064084-1|AAC16554.1|  284|Homo sapiens prenylcysteine carboxyl
           methyltransferase protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 86  THILYSSIIYNFFAHSPLTHILYSSIIYNFFAHSPLTHILYSSIIYNFFA-HSPLTHITV 262
           TH L +S +Y +F H       Y SI       +P+  + Y+  ++ FF   +    I++
Sbjct: 196 THTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTVWRFFRDRTEEEEISL 255

Query: 263 FHAYMYGYL 289
            H +   YL
Sbjct: 256 IHFFGEEYL 264


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,450,545
Number of Sequences: 237096
Number of extensions: 2514935
Number of successful extensions: 4739
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4680
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)