Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5064
(722 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.96
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 24 1.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 2.9
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 23 3.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 8.9
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 8.9
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 8.9
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 8.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 0.96
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 206 YSSIIYNFFAHSPLTHITVFHA 271
YS + N F H +TH + HA
Sbjct: 1344 YSCYVENTFGHDTVTHQLIVHA 1365
Score = 21.8 bits (44), Expect = 6.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 152 YSSIIYNFFAHSPLTHILYSSIIYNFFAHSPLTHIT 259
YS + N F H +TH +I + HSP +T
Sbjct: 1344 YSCYVENTFGHDTVTH----QLIVHAPPHSPQITLT 1375
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 160 YHIQFLR-SLPSYTYSILLYHIQFLRSLPSYTYYRISRIYVWISVL 294
YHI + S +S H+ FLR++P Y++ + VW+ +L
Sbjct: 121 YHIPVIGISSRDSAFSDKNIHVSFLRTVPPYSH----QTDVWVELL 162
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 52 YHIQFLR-SLPSYTYSILLYHIQFLRSLPSYTY 147
YHI + S +S H+ FLR++P Y++
Sbjct: 121 YHIPVIGISSRDSAFSDKNIHVSFLRTVPPYSH 153
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Frame = +1
Query: 55 HIQFLRSLPSYTYSI-----LLYHIQFLR 126
H+ FLR++P Y++ LL H +++
Sbjct: 141 HVSFLRTVPPYSHQTDVWVELLKHFNYMK 169
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Frame = +1
Query: 163 HIQFLRSLPSYTYSI-----LLYHIQFLR 234
H+ FLR++P Y++ LL H +++
Sbjct: 141 HVSFLRTVPPYSHQTDVWVELLKHFNYMK 169
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 666 RVGLQLRLILYNLQAFLDYCLFQMLQNQRYIRNFA 562
+V L + +NL +D C ++QN R R+ +
Sbjct: 311 KVNFALPELQHNLNILVDMCEQDIIQNDRRTRHLS 345
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 419 FYRSLLEQIRNYKYIQLSPLKVFKFVY 339
FYR + ++N K I LSP K VY
Sbjct: 11 FYRISPQILKNDKRIYLSPRTPIKNVY 37
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 341 YIYSTYENISGNTCNDN 291
Y YS Y N + N N+N
Sbjct: 89 YKYSNYNNYNNNNYNNN 105
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 341 YIYSTYENISGNTCNDN 291
Y YS Y N + N N+N
Sbjct: 89 YKYSNYNNYNNNNYNNN 105
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 341 YIYSTYENISGNTCNDN 291
Y YS Y N + N N+N
Sbjct: 89 YKYSNYNNYNNNNYNNN 105
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 341 YIYSTYENISGNTCNDN 291
Y YS Y N + N N+N
Sbjct: 89 YKYSNYNNYNNNNYNNN 105
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 202 SILLYHIQFLRSLPSYTYYRISRIYVWISVLSLHVLPDIFSYVE*IYTN 348
+IL Y+ ++ +LP YT ++ V I +++ L F + E + N
Sbjct: 423 TILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLNN 471
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 139 YTYFILLYHIQFLRSLPSYTYSILLY 216
Y + LLY F+ + + TY+I LY
Sbjct: 227 YGFSFLLYVSGFITTEVAGTYAIFLY 252
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 202 SILLYHIQFLRSLPSYTYYRISRIYVWISVLSLHVLPDIFSYVE*IYTN 348
+IL Y+ ++ +LP YT ++ V I +++ L F + E + N
Sbjct: 423 TILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLNN 471
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 8.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 202 SILLYHIQFLRSLPSYTYYRISRIYVWISVLSLHVLPDIFSYVE*IYTN 348
+IL Y+ ++ +LP YT ++ V I +++ L F + E + N
Sbjct: 49 TILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFESMLNN 97
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,440
Number of Sequences: 438
Number of extensions: 5257
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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