Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5063
(776 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 218 2e-56
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 218 2e-56
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 218 2e-56
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 135 2e-31
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 113 5e-25
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 83 1e-15
BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein. 50 7e-06
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 38 0.053
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 38 0.053
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 38 0.053
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 38 0.053
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 38 0.053
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 37 0.093
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 37 0.093
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 37 0.093
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 37 0.093
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 37 0.093
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 37 0.093
BC057395-1|AAH57395.1| 1433|Homo sapiens HISPPD2A protein protein. 35 0.28
AF543190-1|AAN40768.1| 1194|Homo sapiens KIAA0377 splice variant... 35 0.28
AF502589-1|AAP30845.1| 1194|Homo sapiens KIAA0377 splice variant... 35 0.28
AF502588-1|AAP30844.1| 1408|Homo sapiens KIAA0377 splice variant... 35 0.28
AF502587-1|AAP30843.1| 1408|Homo sapiens KIAA0377 splice variant... 35 0.28
AF502586-1|AAP30842.1| 1430|Homo sapiens KIAA0377 splice variant... 35 0.28
AB002375-1|BAA20831.2| 1412|Homo sapiens KIAA0377 protein. 35 0.28
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 34 0.66
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 34 0.66
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 34 0.66
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 34 0.66
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 33 1.5
BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein. 33 1.5
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 32 2.0
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 32 2.0
BC001325-1|AAH01325.1| 372|Homo sapiens Unknown (protein for IM... 32 2.0
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 32 2.0
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 32 2.0
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 32 2.0
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 31 3.5
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 31 3.5
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 31 3.5
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 31 3.5
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 31 4.6
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 31 4.6
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 31 4.6
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 31 4.6
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 31 4.6
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 31 4.6
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 31 4.6
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 31 4.6
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 31 4.6
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 31 4.6
AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein. 31 6.1
AL589765-15|CAI17176.1| 557|Homo sapiens tudor and KH domain co... 31 6.1
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 218 bits (532), Expect = 2e-56
Identities = 108/247 (43%), Positives = 155/247 (62%), Gaps = 1/247 (0%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
IV GEK + A A+I++I+EE KK T+ VEV KSQHKYVIG +G ++QEIL+ TGV
Sbjct: 268 IVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGV 327
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSVKTATVDAPTWIHXXXXXXXXXXX 361
SVE+PP+DS + T+ L G K+G AL++V KANS ++V AP+W+H
Sbjct: 328 SVEIPPSDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNL 387
Query: 362 XXXTQDFSKVHVDITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELSVDPKFF 541
TQ KVH++ T EDK+ ++GP E+V AQ +++ VK+L+ + YVE+++D KF
Sbjct: 388 AKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFH 447
Query: 542 KHIIGKNGTNINRLKDETGV-VXXXXXXXXXXXXXXXXSHQGVADAERELREMVMKLENE 718
+H+IGK+G NINR+KD+ V V QGV A+REL E+ ++ENE
Sbjct: 448 RHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENE 507
Query: 719 RPKKFML 739
R K ++
Sbjct: 508 RTKDLII 514
Score = 82.6 bits (195), Expect = 1e-15
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
+ + G KN V ++++ ++V+ ++ V + K HK +IG G I++I +E+
Sbjct: 554 VQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNT 613
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVC---EKANSVKTATVDAPTWIHXXXXXXXX 352
+++P +S + TI + G A S++ + ++ V P +H
Sbjct: 614 KIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKG 673
Query: 353 XXXXXXTQDFSKVHVDIT---HSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
++ VH+ D V I GP +VE+A+ +L + + V++
Sbjct: 674 RLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIR 733
Query: 524 VDPKFFKHIIGKNGTNINRLKDETG--VVXXXXXXXXXXXXXXXXSHQGVADAERELREM 697
P++ K +IGK G I +++D TG V+ V +A++EL +
Sbjct: 734 AKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEAL 793
Query: 698 VMKLEN 715
+ L+N
Sbjct: 794 IQNLDN 799
Score = 73.7 bits (173), Expect = 7e-13
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I + G V A+ QIE + ++++ + V + + H+++IG G I I + V
Sbjct: 408 ITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKV 467
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSV---KTATVDAPTWIHXXXXXXXX 352
SV +PP + I + G + A ++ E A+ + +T + H
Sbjct: 468 SVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKG 527
Query: 353 XXXXXXTQDFSKVHV---DITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
F +V + D D V++ GP EVE+ + V +L+ + +
Sbjct: 528 ERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVP 587
Query: 524 VDPKFFKHIIGKNGTNINRLKDET 595
+ +F K+IIGK G NI ++++E+
Sbjct: 588 IFKQFHKNIIGKGGANIKKIREES 611
Score = 54.8 bits (126), Expect = 3e-07
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I I G K G+ A+ ++ I E K+ A R+EV K+ H ++ G + EI++ETG
Sbjct: 196 IKITGTKEGIEKARHEVLLISAEQDKR-AVERLEVEKAFHPFIAGPYNRLVGEIMQETGT 254
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVC----EKANSVKTATVDAPTWIHXXXXXXX 349
+ +PP I G ++ A++++ EK T V+ H
Sbjct: 255 RINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPK 314
Query: 350 XXXXXXXTQDFSKVHVDITHSE---DKVKIDGPPEEVERAQVELDNFVKNLLATLTYVEL 520
+ + V V+I S+ + V + G PE++ +A E+ + K + T +
Sbjct: 315 GNSLQEILER-TGVSVEIPPSDSISETVILRGEPEKLGQALTEV--YAK--ANSFTVSSV 369
Query: 521 SVDPKFFKHIIGKNGTNINRLKDE 592
+ + IIGK G N+ ++ +
Sbjct: 370 AAPSWLHRFIIGKKGQNLAKITQQ 393
Score = 52.8 bits (121), Expect = 1e-06
Identities = 41/205 (20%), Positives = 89/205 (43%), Gaps = 5/205 (2%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I+++G+ + V+ A+ I ++ A+ V +PK H++VIG G +Q++ +T
Sbjct: 127 IMVSGKLDAVMKARKDIVA----RLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTAT 182
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKV-CEKANSVKTAT--VDAPTWIHXXXXXXXX 352
+++P D P+ I + G I A +V A K A ++ H
Sbjct: 183 KIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYN 242
Query: 353 XXXXXXTQDF-SKVHV-DITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELSV 526
Q+ +++++ + + ++ G E++ +A + + T + + V
Sbjct: 243 RLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEV 302
Query: 527 DPKFFKHIIGKNGTNINRLKDETGV 601
K++IG G ++ + + TGV
Sbjct: 303 KKSQHKYVIGPKGNSLQEILERTGV 327
Score = 46.8 bits (106), Expect = 9e-05
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I+I+G K AAK +E + T+ VEVP H+YVIG +G+ I++++ E V
Sbjct: 951 IIISGRKEKCEAAKEALEALVP------VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEV 1004
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSVKTATVD 310
++ +P + + I + G + A + + E+ ++ D
Sbjct: 1005 NIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQED 1047
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I I G + AA+ I +I E+ ++ + V + H +IGARG I++I+ E V
Sbjct: 1101 ITITGYEKNTEAARDAILRIVGEL-EQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKV 1159
Query: 182 SVEMPPTDSP-TGTITLHGPHNKIGLALSKVCEKANSVKTATVDA 313
+ P + +P +T+ G + A+ + VD+
Sbjct: 1160 DIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDS 1204
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 218 bits (532), Expect = 2e-56
Identities = 108/247 (43%), Positives = 155/247 (62%), Gaps = 1/247 (0%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
IV GEK + A A+I++I+EE KK T+ VEV KSQHKYVIG +G ++QEIL+ TGV
Sbjct: 268 IVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGV 327
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSVKTATVDAPTWIHXXXXXXXXXXX 361
SVE+PP+DS + T+ L G K+G AL++V KANS ++V AP+W+H
Sbjct: 328 SVEIPPSDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNL 387
Query: 362 XXXTQDFSKVHVDITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELSVDPKFF 541
TQ KVH++ T EDK+ ++GP E+V AQ +++ VK+L+ + YVE+++D KF
Sbjct: 388 AKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFH 447
Query: 542 KHIIGKNGTNINRLKDETGV-VXXXXXXXXXXXXXXXXSHQGVADAERELREMVMKLENE 718
+H+IGK+G NINR+KD+ V V QGV A+REL E+ ++ENE
Sbjct: 448 RHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENE 507
Query: 719 RPKKFML 739
R K ++
Sbjct: 508 RTKDLII 514
Score = 82.6 bits (195), Expect = 1e-15
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
+ + G KN V ++++ ++V+ ++ V + K HK +IG G I++I +E+
Sbjct: 554 VQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNT 613
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVC---EKANSVKTATVDAPTWIHXXXXXXXX 352
+++P +S + TI + G A S++ + ++ V P +H
Sbjct: 614 KIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKG 673
Query: 353 XXXXXXTQDFSKVHVDIT---HSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
++ VH+ D V I GP +VE+A+ +L + + V++
Sbjct: 674 RLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIR 733
Query: 524 VDPKFFKHIIGKNGTNINRLKDETG--VVXXXXXXXXXXXXXXXXSHQGVADAERELREM 697
P++ K +IGK G I +++D TG V+ V +A++EL +
Sbjct: 734 AKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEAL 793
Query: 698 VMKLEN 715
+ L+N
Sbjct: 794 IQNLDN 799
Score = 73.7 bits (173), Expect = 7e-13
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I + G V A+ QIE + ++++ + V + + H+++IG G I I + V
Sbjct: 408 ITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKV 467
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSV---KTATVDAPTWIHXXXXXXXX 352
SV +PP + I + G + A ++ E A+ + +T + H
Sbjct: 468 SVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKG 527
Query: 353 XXXXXXTQDFSKVHV---DITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
F +V + D D V++ GP EVE+ + V +L+ + +
Sbjct: 528 ERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVP 587
Query: 524 VDPKFFKHIIGKNGTNINRLKDET 595
+ +F K+IIGK G NI ++++E+
Sbjct: 588 IFKQFHKNIIGKGGANIKKIREES 611
Score = 54.8 bits (126), Expect = 3e-07
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I I G K G+ A+ ++ I E K+ A R+EV K+ H ++ G + EI++ETG
Sbjct: 196 IKITGTKEGIEKARHEVLLISAEQDKR-AVERLEVEKAFHPFIAGPYNRLVGEIMQETGT 254
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVC----EKANSVKTATVDAPTWIHXXXXXXX 349
+ +PP I G ++ A++++ EK T V+ H
Sbjct: 255 RINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPK 314
Query: 350 XXXXXXXTQDFSKVHVDITHSE---DKVKIDGPPEEVERAQVELDNFVKNLLATLTYVEL 520
+ + V V+I S+ + V + G PE++ +A E+ + K + T +
Sbjct: 315 GNSLQEILER-TGVSVEIPPSDSISETVILRGEPEKLGQALTEV--YAK--ANSFTVSSV 369
Query: 521 SVDPKFFKHIIGKNGTNINRLKDE 592
+ + IIGK G N+ ++ +
Sbjct: 370 AAPSWLHRFIIGKKGQNLAKITQQ 393
Score = 52.8 bits (121), Expect = 1e-06
Identities = 41/205 (20%), Positives = 89/205 (43%), Gaps = 5/205 (2%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I+++G+ + V+ A+ I ++ A+ V +PK H++VIG G +Q++ +T
Sbjct: 127 IMVSGKLDAVMKARKDIVA----RLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTAT 182
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKV-CEKANSVKTAT--VDAPTWIHXXXXXXXX 352
+++P D P+ I + G I A +V A K A ++ H
Sbjct: 183 KIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYN 242
Query: 353 XXXXXXTQDF-SKVHV-DITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELSV 526
Q+ +++++ + + ++ G E++ +A + + T + + V
Sbjct: 243 RLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEV 302
Query: 527 DPKFFKHIIGKNGTNINRLKDETGV 601
K++IG G ++ + + TGV
Sbjct: 303 KKSQHKYVIGPKGNSLQEILERTGV 327
Score = 46.8 bits (106), Expect = 9e-05
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I+I+G K AAK +E + T+ VEVP H+YVIG +G+ I++++ E V
Sbjct: 951 IIISGRKEKCEAAKEALEALVP------VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEV 1004
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSVKTATVD 310
++ +P + + I + G + A + + E+ ++ D
Sbjct: 1005 NIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQED 1047
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I I G + AA+ I +I E+ ++ + V + H +IGARG I++I+ E V
Sbjct: 1101 ITITGYEKNTEAARDAILRIVGEL-EQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKV 1159
Query: 182 SVEMPPTDSP-TGTITLHGPHNKIGLALSKVCEKANSVKTATVDA 313
+ P + +P +T+ G + A+ + VD+
Sbjct: 1160 DIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDS 1204
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 218 bits (532), Expect = 2e-56
Identities = 108/247 (43%), Positives = 155/247 (62%), Gaps = 1/247 (0%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
IV GEK + A A+I++I+EE KK T+ VEV KSQHKYVIG +G ++QEIL+ TGV
Sbjct: 268 IVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGV 327
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSVKTATVDAPTWIHXXXXXXXXXXX 361
SVE+PP+DS + T+ L G K+G AL++V KANS ++V AP+W+H
Sbjct: 328 SVEIPPSDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNL 387
Query: 362 XXXTQDFSKVHVDITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELSVDPKFF 541
TQ KVH++ T EDK+ ++GP E+V AQ +++ VK+L+ + YVE+++D KF
Sbjct: 388 AKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFH 447
Query: 542 KHIIGKNGTNINRLKDETGV-VXXXXXXXXXXXXXXXXSHQGVADAERELREMVMKLENE 718
+H+IGK+G NINR+KD+ V V QGV A+REL E+ ++ENE
Sbjct: 448 RHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENE 507
Query: 719 RPKKFML 739
R K ++
Sbjct: 508 RTKDLII 514
Score = 82.6 bits (195), Expect = 1e-15
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
+ + G KN V ++++ ++V+ ++ V + K HK +IG G I++I +E+
Sbjct: 554 VQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNT 613
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVC---EKANSVKTATVDAPTWIHXXXXXXXX 352
+++P +S + TI + G A S++ + ++ V P +H
Sbjct: 614 KIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKG 673
Query: 353 XXXXXXTQDFSKVHVDIT---HSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
++ VH+ D V I GP +VE+A+ +L + + V++
Sbjct: 674 RLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIR 733
Query: 524 VDPKFFKHIIGKNGTNINRLKDETG--VVXXXXXXXXXXXXXXXXSHQGVADAERELREM 697
P++ K +IGK G I +++D TG V+ V +A++EL +
Sbjct: 734 AKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEAL 793
Query: 698 VMKLEN 715
+ L+N
Sbjct: 794 IQNLDN 799
Score = 73.7 bits (173), Expect = 7e-13
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I + G V A+ QIE + ++++ + V + + H+++IG G I I + V
Sbjct: 408 ITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKV 467
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSV---KTATVDAPTWIHXXXXXXXX 352
SV +PP + I + G + A ++ E A+ + +T + H
Sbjct: 468 SVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKG 527
Query: 353 XXXXXXTQDFSKVHV---DITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
F +V + D D V++ GP EVE+ + V +L+ + +
Sbjct: 528 ERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVP 587
Query: 524 VDPKFFKHIIGKNGTNINRLKDET 595
+ +F K+IIGK G NI ++++E+
Sbjct: 588 IFKQFHKNIIGKGGANIKKIREES 611
Score = 54.8 bits (126), Expect = 3e-07
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I I G K G+ A+ ++ I E K+ A R+EV K+ H ++ G + EI++ETG
Sbjct: 196 IKITGTKEGIEKARHEVLLISAEQDKR-AVERLEVEKAFHPFIAGPYNRLVGEIMQETGT 254
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVC----EKANSVKTATVDAPTWIHXXXXXXX 349
+ +PP I G ++ A++++ EK T V+ H
Sbjct: 255 RINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPK 314
Query: 350 XXXXXXXTQDFSKVHVDITHSE---DKVKIDGPPEEVERAQVELDNFVKNLLATLTYVEL 520
+ + V V+I S+ + V + G PE++ +A E+ + K + T +
Sbjct: 315 GNSLQEILER-TGVSVEIPPSDSISETVILRGEPEKLGQALTEV--YAK--ANSFTVSSV 369
Query: 521 SVDPKFFKHIIGKNGTNINRLKDE 592
+ + IIGK G N+ ++ +
Sbjct: 370 AAPSWLHRFIIGKKGQNLAKITQQ 393
Score = 52.8 bits (121), Expect = 1e-06
Identities = 41/205 (20%), Positives = 89/205 (43%), Gaps = 5/205 (2%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I+++G+ + V+ A+ I ++ A+ V +PK H++VIG G +Q++ +T
Sbjct: 127 IMVSGKLDAVMKARKDIVA----RLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTAT 182
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKV-CEKANSVKTAT--VDAPTWIHXXXXXXXX 352
+++P D P+ I + G I A +V A K A ++ H
Sbjct: 183 KIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYN 242
Query: 353 XXXXXXTQDF-SKVHV-DITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELSV 526
Q+ +++++ + + ++ G E++ +A + + T + + V
Sbjct: 243 RLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEV 302
Query: 527 DPKFFKHIIGKNGTNINRLKDETGV 601
K++IG G ++ + + TGV
Sbjct: 303 KKSQHKYVIGPKGNSLQEILERTGV 327
Score = 46.8 bits (106), Expect = 9e-05
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I+I+G K AAK +E + T+ VEVP H+YVIG +G+ I++++ E V
Sbjct: 951 IIISGRKEKCEAAKEALEALVP------VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEV 1004
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSVKTATVD 310
++ +P + + I + G + A + + E+ ++ D
Sbjct: 1005 NIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQED 1047
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I I G + AA+ I +I E+ ++ + V + H +IGARG I++I+ E V
Sbjct: 1101 ITITGYEKNTEAARDAILRIVGEL-EQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKV 1159
Query: 182 SVEMPPTDSP-TGTITLHGPHNKIGLALSKVCEKANSVKTATVDA 313
+ P + +P +T+ G + A+ + VD+
Sbjct: 1160 DIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDS 1204
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 135 bits (326), Expect = 2e-31
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Frame = +2
Query: 164 LKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSKVC----EKANSVKTATVDAPTWIHX 331
++ETG + +PP I G ++ A++++ EKANS ++V AP+W+H
Sbjct: 1 MQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKANSFTVSSVAAPSWLHR 60
Query: 332 XXXXXXXXXXXXXTQDFSKVHVDITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTY 511
TQ KVH++ T EDK+ ++GP E+V AQ +++ VK+L+ + Y
Sbjct: 61 FIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDY 120
Query: 512 VELSVDPKFFKHIIGKNGTNINRLKDETGV-VXXXXXXXXXXXXXXXXSHQGVADAEREL 688
VE+++D KF +H+IGK+G NINR+KD+ V V QGV A+REL
Sbjct: 121 VEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKREL 180
Query: 689 REMVMKLENERPKKFML 739
E+ +LENER K ++
Sbjct: 181 LELASRLENERTKDLII 197
Score = 82.6 bits (195), Expect = 1e-15
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
+ + G KN V ++++ ++V+ ++ V + K HK +IG G I++I +E+
Sbjct: 237 VQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNT 296
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVC---EKANSVKTATVDAPTWIHXXXXXXXX 352
+++P +S + TI + G A S++ + ++ V P +H
Sbjct: 297 KIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKG 356
Query: 353 XXXXXXTQDFSKVHVDIT---HSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
++ VH+ D V I GP +VE+A+ +L + + V++
Sbjct: 357 RLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIR 416
Query: 524 VDPKFFKHIIGKNGTNINRLKDETG--VVXXXXXXXXXXXXXXXXSHQGVADAERELREM 697
P++ K +IGK G I +++D TG V+ V +A++EL +
Sbjct: 417 AKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEAL 476
Query: 698 VMKLEN 715
+ L+N
Sbjct: 477 IQNLDN 482
Score = 73.7 bits (173), Expect = 7e-13
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I + G V A+ QIE + ++++ + V + + H+++IG G I I + V
Sbjct: 91 ITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKV 150
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSV---KTATVDAPTWIHXXXXXXXX 352
SV +PP + I + G + A ++ E A+ + +T + H
Sbjct: 151 SVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRLENERTKDLIIEQRFHRTIIGQKG 210
Query: 353 XXXXXXTQDFSKVHV---DITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
F +V + D D V++ GP EVE+ + V +L+ + +
Sbjct: 211 ERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVP 270
Query: 524 VDPKFFKHIIGKNGTNINRLKDET 595
+ +F K+IIGK G NI ++++E+
Sbjct: 271 IFKQFHKNIIGKGGANIKKIREES 294
Score = 61.7 bits (143), Expect = 3e-09
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
IV GEK + A A+I++I+EE V P H+++IG +G + +I ++
Sbjct: 20 IVFTGEKEQLAQAVARIKKIYEEKANSFTVSSVAAPSWLHRFIIGKKGQNLAKITQQM-P 78
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSK----VCEKANSVKTATVDAPTWIHXXXXXXX 349
V + T+ ITL GP + +A + V + N + ++ H
Sbjct: 79 KVHIEFTEG-EDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFH-RHLIGK 136
Query: 350 XXXXXXXTQDFSKVHVDITHSEDK---VKIDGPPEEVERAQVELDNFVKNLLATLTYVEL 520
+D KV V I +K ++I+G P+ V++A+ EL L T +L
Sbjct: 137 SGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRLENERT-KDL 195
Query: 521 SVDPKFFKHIIGKNGTNINRLKDE 592
++ +F + IIG+ G I ++D+
Sbjct: 196 IIEQRFHRTIIGQKGERIREIRDK 219
Score = 46.8 bits (106), Expect = 9e-05
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I+I+G K AAK +E + T+ VEVP H+YVIG +G+ I++++ E V
Sbjct: 634 IIISGRKEKCEAAKEALEALVP------VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEV 687
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSVKTATVD 310
++ +P + + I + G + A + + E+ ++ D
Sbjct: 688 NIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQED 730
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 113 bits (273), Expect = 5e-25
Identities = 54/144 (37%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Frame = +2
Query: 311 APTWIHXXXXXXXXXXXXXXTQDFSKVHVDITHSEDKVKIDGPPEEVERAQVELDNFVKN 490
AP+W+H TQ KVH++ T EDK+ ++GP E+V AQ +++ VK+
Sbjct: 1 APSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKD 60
Query: 491 LLATLTYVELSVDPKFFKHIIGKNGTNINRLKDETGV-VXXXXXXXXXXXXXXXXSHQGV 667
L+ + YVE+++D KF +H+IGK+G NINR+KD+ V V QGV
Sbjct: 61 LINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGV 120
Query: 668 ADAERELREMVMKLENERPKKFML 739
A+REL E+ ++ENER K ++
Sbjct: 121 QQAKRELLELASRMENERTKDLII 144
Score = 82.6 bits (195), Expect = 1e-15
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
+ + G KN V ++++ ++V+ ++ V + K HK +IG G I++I +E+
Sbjct: 184 VQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNT 243
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVC---EKANSVKTATVDAPTWIHXXXXXXXX 352
+++P +S + TI + G A S++ + ++ V P +H
Sbjct: 244 KIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKG 303
Query: 353 XXXXXXTQDFSKVHVDIT---HSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
++ VH+ D V I GP +VE+A+ +L + + V++
Sbjct: 304 RLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIR 363
Query: 524 VDPKFFKHIIGKNGTNINRLKDETG--VVXXXXXXXXXXXXXXXXSHQGVADAERELREM 697
P++ K +IGK G I +++D TG V+ V +A++EL +
Sbjct: 364 AKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEAL 423
Query: 698 VMKLEN 715
+ L+N
Sbjct: 424 IQNLDN 429
Score = 73.7 bits (173), Expect = 7e-13
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I + G V A+ QIE + ++++ + V + + H+++IG G I I + V
Sbjct: 38 ITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKV 97
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSV---KTATVDAPTWIHXXXXXXXX 352
SV +PP + I + G + A ++ E A+ + +T + H
Sbjct: 98 SVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKG 157
Query: 353 XXXXXXTQDFSKVHV---DITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
F +V + D D V++ GP EVE+ + V +L+ + +
Sbjct: 158 ERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVP 217
Query: 524 VDPKFFKHIIGKNGTNINRLKDET 595
+ +F K+IIGK G NI ++++E+
Sbjct: 218 IFKQFHKNIIGKGGANIKKIREES 241
Score = 46.8 bits (106), Expect = 9e-05
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I+I+G K AAK +E + T+ VEVP H+YVIG +G+ I++++ E V
Sbjct: 581 IIISGRKEKCEAAKEALEALVP------VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEV 634
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSVKTATVD 310
++ +P + + I + G + A + + E+ ++ D
Sbjct: 635 NIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQED 677
Score = 41.9 bits (94), Expect = 0.002
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Frame = +2
Query: 107 PKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK----VC 274
P H+++IG +G + +I ++ V + T+ ITL GP + +A + V
Sbjct: 2 PSWLHRFIIGKKGQNLAKITQQM-PKVHIEFTEG-EDKITLEGPTEDVNVAQEQIEGMVK 59
Query: 275 EKANSVKTATVDAPTWIHXXXXXXXXXXXXXXTQDFSKVHVDITHSEDK---VKIDGPPE 445
+ N + ++ H +D KV V I +K ++I+G P+
Sbjct: 60 DLINRMDYVEINIDHKFH-RHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQ 118
Query: 446 EVERAQVELDNFVKNLLATLTYVELSVDPKFFKHIIGKNGTNINRLKDE 592
V++A+ EL + T +L ++ +F + IIG+ G I ++D+
Sbjct: 119 GVQQAKRELLELASRMENERT-KDLIIEQRFHRTIIGQKGERIREIRDK 166
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I I G + AA+ I +I E+ ++ + V + H +IGARG I++I+ E V
Sbjct: 731 ITITGYEKNTEAARDAILRIVGEL-EQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKV 789
Query: 182 SVEMPPTDSP-TGTITLHGPHNKIGLALSKVCEKANSVKTATVDA 313
+ P + +P +T+ G + A+ + VD+
Sbjct: 790 DIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDS 834
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 82.6 bits (195), Expect = 1e-15
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
+ + G KN V ++++ ++V+ ++ V + K HK +IG G I++I +E+
Sbjct: 51 VQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNT 110
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVC---EKANSVKTATVDAPTWIHXXXXXXXX 352
+++P +S + TI + G A S++ + ++ V P +H
Sbjct: 111 KIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKG 170
Query: 353 XXXXXXTQDFSKVHVDIT---HSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELS 523
++ VH+ D V I GP +VE+A+ +L + + V++
Sbjct: 171 RLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIR 230
Query: 524 VDPKFFKHIIGKNGTNINRLKDETG--VVXXXXXXXXXXXXXXXXSHQGVADAERELREM 697
P++ K +IGK G I +++D TG V+ V +A++EL +
Sbjct: 231 AKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEAL 290
Query: 698 VMKLEN 715
+ L+N
Sbjct: 291 IQNLDN 296
Score = 44.8 bits (101), Expect = 4e-04
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +2
Query: 398 DITHSEDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELSVDPKFFKHIIGKNGTNIN 577
D D V++ GP EVE+ + V +L+ + + + +F K+IIGK G NI
Sbjct: 43 DPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIK 102
Query: 578 RLKDET 595
++++E+
Sbjct: 103 KIREES 108
Score = 38.3 bits (85), Expect = 0.030
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKE 172
I+I+G K AAK +E + T+ VEVP + H+YVIG +G+ I++++ E
Sbjct: 448 IIISGRKEKCEAAKEALEALVP------VTIEVEVPFNLHRYVIGQKGSGIRKMMDE 498
>BC113120-1|AAI13121.1| 589|Homo sapiens HDLBP protein protein.
Length = 589
Score = 50.4 bits (115), Expect = 7e-06
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Frame = +2
Query: 389 VHVDITHS-EDKVKIDGPPEEVERAQVELDNFVKNLLATLTYVELSVDPKFFKHIIGKNG 565
+H + S D V I GP +VE+A+ +L + + V++ P++ K +IGK G
Sbjct: 9 IHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGG 68
Query: 566 TNINRLKDETG--VVXXXXXXXXXXXXXXXXSHQGVADAERELREMVMKLEN 715
I +++D TG V+ V +A++EL ++ L+N
Sbjct: 69 GKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDN 120
Score = 46.8 bits (106), Expect = 9e-05
Identities = 28/103 (27%), Positives = 52/103 (50%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I+I+G K AAK +E + T+ VEVP H+YVIG +G+ I++++ E V
Sbjct: 272 IIISGRKEKCEAAKEALEALVP------VTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEV 325
Query: 182 SVEMPPTDSPTGTITLHGPHNKIGLALSKVCEKANSVKTATVD 310
++ +P + + I + G + A + + E+ ++ D
Sbjct: 326 NIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQED 368
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
I I G + AA+ I +I E+ ++ + V + H +IGARG I++I+ E V
Sbjct: 422 ITITGYEKNTEAARDAILRIVGEL-EQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKV 480
Query: 182 SVEMPPTDSP-TGTITLHGPHNKIGLALSKVCEKANSVKTATVDA 313
+ P + +P +T+ G + A+ + VD+
Sbjct: 481 DIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDS 525
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 37.5 bits (83), Expect = 0.053
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++ I +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 37.5 bits (83), Expect = 0.053
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++ I +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 37.5 bits (83), Expect = 0.053
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++ I +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 37.5 bits (83), Expect = 0.053
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++ I +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 37.5 bits (83), Expect = 0.053
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++ I +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 36.7 bits (81), Expect = 0.093
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++++ +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 36.7 bits (81), Expect = 0.093
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++++ +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.093
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++++ +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 36.7 bits (81), Expect = 0.093
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++++ +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 36.7 bits (81), Expect = 0.093
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++++ +E+G + + + P ITL GP N I A +
Sbjct: 27 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAM 86
Query: 269 VCEK 280
+ +K
Sbjct: 87 IIDK 90
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 36.7 bits (81), Expect = 0.093
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G +++++ +E+G + + + P ITL GP N I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAM 74
Query: 269 VCEK 280
+ +K
Sbjct: 75 IIDK 78
>BC057395-1|AAH57395.1| 1433|Homo sapiens HISPPD2A protein protein.
Length = 1433
Score = 35.1 bits (77), Expect = 0.28
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 65 EEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
EE+ + C V VEV K HK+ +G G+ +QE L E G E P +
Sbjct: 1333 EEVSQPCQGVSVEVGKLVHKFHVGV-GSLVQETLVEVGSPAEEIPEE 1378
>AF543190-1|AAN40768.1| 1194|Homo sapiens KIAA0377 splice variant 4
protein.
Length = 1194
Score = 35.1 bits (77), Expect = 0.28
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 65 EEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
EE+ + C V VEV K HK+ +G G+ +QE L E G E P +
Sbjct: 1094 EEVSQPCQGVSVEVGKLVHKFHVGV-GSLVQETLVEVGSPAEEIPEE 1139
>AF502589-1|AAP30845.1| 1194|Homo sapiens KIAA0377 splice variant 4
protein.
Length = 1194
Score = 35.1 bits (77), Expect = 0.28
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 65 EEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
EE+ + C V VEV K HK+ +G G+ +QE L E G E P +
Sbjct: 1094 EEVSQPCQGVSVEVGKLVHKFHVGV-GSLVQETLVEVGSPAEEIPEE 1139
>AF502588-1|AAP30844.1| 1408|Homo sapiens KIAA0377 splice variant 3
protein.
Length = 1408
Score = 35.1 bits (77), Expect = 0.28
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 65 EEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
EE+ + C V VEV K HK+ +G G+ +QE L E G E P +
Sbjct: 1308 EEVSQPCQGVSVEVGKLVHKFHVGV-GSLVQETLVEVGSPAEEIPEE 1353
>AF502587-1|AAP30843.1| 1408|Homo sapiens KIAA0377 splice variant 2
protein.
Length = 1408
Score = 35.1 bits (77), Expect = 0.28
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 65 EEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
EE+ + C V VEV K HK+ +G G+ +QE L E G E P +
Sbjct: 1308 EEVSQPCQGVSVEVGKLVHKFHVGV-GSLVQETLVEVGSPAEEIPEE 1353
>AF502586-1|AAP30842.1| 1430|Homo sapiens KIAA0377 splice variant 1
protein.
Length = 1430
Score = 35.1 bits (77), Expect = 0.28
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 65 EEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
EE+ + C V VEV K HK+ +G G+ +QE L E G E P +
Sbjct: 1330 EEVSQPCQGVSVEVGKLVHKFHVGV-GSLVQETLVEVGSPAEEIPEE 1375
>AB002375-1|BAA20831.2| 1412|Homo sapiens KIAA0377 protein.
Length = 1412
Score = 35.1 bits (77), Expect = 0.28
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 65 EEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
EE+ + C V VEV K HK+ +G G+ +QE L E G E P +
Sbjct: 1312 EEVSQPCQGVSVEVGKLVHKFHVGV-GSLVQETLVEVGSPAEEIPEE 1357
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 33.9 bits (74), Expect = 0.66
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G T++++ +E+G + + + P +T+ GP + I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAM 74
Query: 269 VCEK 280
+ K
Sbjct: 75 IAYK 78
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 33.9 bits (74), Expect = 0.66
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G T++++ +E+G + + + P +T+ GP + I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAM 74
Query: 269 VCEK 280
+ K
Sbjct: 75 IAYK 78
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 33.9 bits (74), Expect = 0.66
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G T++++ +E+G + + + P +T+ GP + I A +
Sbjct: 47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAM 106
Query: 269 VCEK 280
+ K
Sbjct: 107 IAYK 110
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.66
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTDSPTGTITLHGPHNKIGLALSK 268
T+R+ + + +IG +G T++++ +E+G + + + P +T+ GP + I A +
Sbjct: 15 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAM 74
Query: 269 VCEK 280
+ K
Sbjct: 75 IAYK 78
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 47 QIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPP 199
Q+ +H++ + T +VP ++IG G I I +E+G +++ P
Sbjct: 88 QLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP 138
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +2
Query: 92 VRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD--SPTGTITLHGPHNKIGLALS 265
+ V +P+ VIG G I++I + GV ++ P D +P + GP ++ A
Sbjct: 278 IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAE 337
Query: 266 KVCEKANSVKTATVDAP 316
+ + SV+ P
Sbjct: 338 IITDLLRSVQAGNPGGP 354
>BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein.
Length = 304
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 47 QIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPP 199
Q+ +H++ + T +VP ++IG G I I +E+G +++ P
Sbjct: 88 QLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP 138
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD--SPTGTITLHGPHNK 247
++ V VP+ VIG G I++I + GV ++ P D SP + GP ++
Sbjct: 283 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDR 337
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +2
Query: 92 VRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD--SPTGTITLHGPHNKIGLALS 265
+ V +P+ VIG G I++I + GV ++ P D +P + GP ++ A
Sbjct: 277 IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAE 336
Query: 266 KVCEKANSVKTATVDAP 316
+ + SV+ P
Sbjct: 337 IITDLLRSVQAGNPGGP 353
>BC001325-1|AAH01325.1| 372|Homo sapiens Unknown (protein for
IMAGE:3456579) protein.
Length = 372
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD--SPTGTITLHGPHNK 247
++ V VP+ VIG G I++I + GV ++ P D SP + GP ++
Sbjct: 11 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDR 65
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD--SPTGTITLHGPHNK 247
++ V VP+ VIG G I++I + GV ++ P D SP + GP ++
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDR 309
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD--SPTGTITLHGPHNK 247
++ V VP+ VIG G I++I + GV ++ P D SP + GP ++
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDR 309
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +2
Query: 92 VRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD--SPTGTITLHGPHNKIGLALS 265
+ V +P+ VIG G I++I + GV ++ P D +P + GP ++ A
Sbjct: 128 IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAE 187
Query: 266 KVCEKANSVKTATVDAP 316
+ + SV+ P
Sbjct: 188 IITDLLRSVQAGNPGGP 204
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 92 VRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
+ + VP+ K +IG +G I+++ K+TG +++ D
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTED 92
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 92 VRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
+ + VP+ K +IG +G I+++ K+TG +++ D
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTED 92
Score = 30.7 bits (66), Expect = 6.1
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
++I+G V AKA I QI E + ++ VP+ +IG G TI+ I K +G
Sbjct: 99 LLISGFPVQVCKAKAAIHQILTENTP--VSEQLSVPQRSVGRIIGRGGETIRSICKASGA 156
Query: 182 SV----EMPPTDSPTGTITLHGPHNKIGLALSKVCEKAN 286
+ E T + I + G ++ A + EK +
Sbjct: 157 KITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVS 195
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 92 VRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
+ + VP+ K +IG +G I+++ K+TG +++ D
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTED 92
Score = 30.7 bits (66), Expect = 6.1
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
++I+G V AKA I QI E + ++ VP+ +IG G TI+ I K +G
Sbjct: 99 LLISGFPVQVCKAKAAIHQILTENTP--VSEQLSVPQRSVGRIIGRGGETIRSICKASGA 156
Query: 182 SV----EMPPTDSPTGTITLHGPHNKIGLALSKVCEKAN 286
+ E T + I + G ++ A + EK +
Sbjct: 157 KITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVS 195
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 31.5 bits (68), Expect = 3.5
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 92 VRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD 205
+ + VP+ K +IG +G I+++ K+TG +++ D
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTED 92
Score = 30.7 bits (66), Expect = 6.1
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
++I+G V AKA I QI E + ++ VP+ +IG G TI+ I K +G
Sbjct: 99 LLISGFPVQVCKAKAAIHQILTENTP--VSEQLSVPQRSVGRIIGRGGETIRSICKASGA 156
Query: 182 SV----EMPPTDSPTGTITLHGPHNKIGLALSKVCEKAN 286
+ E T + I + G ++ A + EK +
Sbjct: 157 KITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVS 195
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 444
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 354 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 409
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEM--PPTDSPTGTITLHGPHNKI 250
T +V +PK +IG G I++I E+G S+++ P S IT+ G ++I
Sbjct: 367 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQI 422
>AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein.
Length = 520
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 89 TVRVEVPKSQHKYVIGARGTTIQEILKETGVSVEMPPTD-SPTGTIT 226
T+RV VP V+G +G TI+ I ++T + P D P IT
Sbjct: 225 TIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEIT 271
>AL589765-15|CAI17176.1| 557|Homo sapiens tudor and KH domain
containing protein.
Length = 557
Score = 30.7 bits (66), Expect = 6.1
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +2
Query: 2 IVIAGEKNGVLAAKAQIEQIHEEMVKKCATVRVEVPKSQHKYVIGARGTTIQEILKETGV 181
++I+G V AKA I QI E + ++ VP+ +IG G TI+ I K +G
Sbjct: 95 LLISGFPVQVCKAKAAIHQILTENTP--VSEQLSVPQRSVGRIIGRGGETIRSICKASGA 152
Query: 182 SV----EMPPTDSPTGTITLHGPHNKIGLALSKVCEKAN 286
+ E T + I + G ++ A + EK +
Sbjct: 153 KITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVS 191
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,385,502
Number of Sequences: 237096
Number of extensions: 2216822
Number of successful extensions: 4545
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 4137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4531
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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