Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5056
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 28 0.075
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 0.92
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 24 1.2
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 24 1.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 24 1.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 1.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 24 1.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 1.2
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 4.9
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.5
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 6.5
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 8.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 28.3 bits (60), Expect = 0.075
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 544 WHFNGDRVGLLYFNLVGFVD 603
W FNGD+V L +N FVD
Sbjct: 172 WTFNGDQVSLALYNNKNFVD 191
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 24.6 bits (51), Expect = 0.92
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 671 PSMLKSPTQCPYPSQCPTKLRSLSTNPTRL 582
PS SPT PY ++ K S+ T++
Sbjct: 122 PSSQASPTSIPYATRAEIKTESIQPETTKV 151
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 161 NNAHNNQLIHRTQPQNRERPN 223
NN HN+Q H ++ NR N
Sbjct: 443 NNQHNDQAHHSSKSNNRHNNN 463
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -2
Query: 444 YKEVQ---VPLVKEVPYPVKYHVPIYF 373
YK++Q + ++++P PV VP+Y+
Sbjct: 97 YKKLQYYNINYIEQIPVPVPVPVPVYY 123
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -2
Query: 444 YKEVQ---VPLVKEVPYPVKYHVPIYF 373
YK++Q + ++++P PV VP+Y+
Sbjct: 97 YKKLQYYNINYIEQIPVPVPVPVPVYY 123
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -2
Query: 444 YKEVQ---VPLVKEVPYPVKYHVPIYF 373
YK++Q + ++++P PV VP+Y+
Sbjct: 97 YKKLQYYNINYIEQIPVPVPIPVPVYY 123
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -2
Query: 444 YKEVQ---VPLVKEVPYPVKYHVPIYF 373
YK++Q + ++++P PV VP+Y+
Sbjct: 97 YKKLQYYNINYIEQIPVPVPVPVPVYY 123
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -2
Query: 444 YKEVQ---VPLVKEVPYPVKYHVPIYF 373
YK++Q + ++++P PV VP+Y+
Sbjct: 330 YKKLQYYNINYIEQIPVPVPVPVPVYY 356
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +1
Query: 574 LYFNLVGFVDRDLNFVGHWLGYGHWVGLFNMD 669
+ ++L+G + V +G GHW+G ++D
Sbjct: 96 MVYSLLGIIIAYTGDVHGVIGAGHWIGDHDVD 127
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = +1
Query: 562 RVGLLYFNLVGFVDRDLNFVGHWLGYGHWVG 654
R L+ N+ R N + L GHW G
Sbjct: 264 RKATLFLNMASVFMRIFNLICMMLLIGHWSG 294
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 683 LSLTPSMLKSPTQCPYPSQCPTKLRSLSTNPTRL 582
L LT +SP+ SQCP LS+ + L
Sbjct: 673 LHLTSPPARSPSSQAQASQCPQTASLLSSTHSTL 706
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 505 VRDFLDDFVRVWYWH 549
V F+ DFV+V WH
Sbjct: 126 VPSFVADFVKVLSWH 140
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 689 TCLSLTPSMLKSPTQCPYPS 630
T SL + + T+CPYPS
Sbjct: 620 TIPSLNSTNVTLSTKCPYPS 639
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 8.6
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 98 HNFASRKPTPEXLYTRENVALNNAHNNQL 184
H F + TPE L E HNN L
Sbjct: 272 HLFRTASSTPEDLQDLEEPLTTIQHNNCL 300
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,585
Number of Sequences: 438
Number of extensions: 3451
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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