Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5052
         (425 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein.          32   0.70 
AK022696-1|BAB14186.1|  938|Homo sapiens protein ( Homo sapiens ...    32   0.70 
U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein.                    31   2.2  
U55757-2|AAB38310.1| 1708|Homo sapiens ataxia-telangiectasia mut...    31   2.2  
U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia pro...    31   2.2  
U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein.                    31   2.2  
U26455-1|AAA86520.1| 1708|Homo sapiens phosphatidylinositol 3-ki...    31   2.2  
AK001027-1|BAA91472.1|  397|Homo sapiens protein ( Homo sapiens ...    30   3.8  
AK074080-1|BAB84906.2|  302|Homo sapiens FLJ00151 protein protein.     29   8.7  

>BC038449-1|AAH38449.1| 1139|Homo sapiens MGA protein protein.
          Length = 1139

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = -3

Query: 165 DIHIKQEPLDDYSMEQ---HEGLMIKQEPPDE 79
           ++ IK+EPLDDY  E     EG+ +KQE  DE
Sbjct: 378 NVVIKEEPLDDYDYELGECPEGVTVKQEETDE 409


>AK022696-1|BAB14186.1|  938|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12634 fis, clone NT2RM4001858, weakly similar to
           T-BOX CONTAINING PROTEIN TBX6L. ).
          Length = 938

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = -3

Query: 165 DIHIKQEPLDDYSMEQ---HEGLMIKQEPPDE 79
           ++ IK+EPLDDY  E     EG+ +KQE  DE
Sbjct: 182 NVVIKEEPLDDYDYELGECPEGVTVKQEETDE 213


>U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein.
          Length = 3056

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 147  EPLDDYSMEQHEGLMIKQEPPDETKYNPDLS 55
            +PL D++M   + L ++Q P DET+ +P L+
Sbjct: 2955 DPLFDWTMNPLKALYLQQRPEDETELHPTLN 2985


>U55757-2|AAB38310.1| 1708|Homo sapiens ataxia-telangiectasia mutated
            protein.
          Length = 1708

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 147  EPLDDYSMEQHEGLMIKQEPPDETKYNPDLS 55
            +PL D++M   + L ++Q P DET+ +P L+
Sbjct: 1607 DPLFDWTMNPLKALYLQQRPEDETELHPTLN 1637


>U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia protein.
          Length = 3056

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 147  EPLDDYSMEQHEGLMIKQEPPDETKYNPDLS 55
            +PL D++M   + L ++Q P DET+ +P L+
Sbjct: 2955 DPLFDWTMNPLKALYLQQRPEDETELHPTLN 2985


>U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein.
          Length = 3056

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 147  EPLDDYSMEQHEGLMIKQEPPDETKYNPDLS 55
            +PL D++M   + L ++Q P DET+ +P L+
Sbjct: 2955 DPLFDWTMNPLKALYLQQRPEDETELHPTLN 2985


>U26455-1|AAA86520.1| 1708|Homo sapiens phosphatidylinositol 3-kinase
            homolog protein.
          Length = 1708

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 147  EPLDDYSMEQHEGLMIKQEPPDETKYNPDLS 55
            +PL D++M   + L ++Q P DET+ +P L+
Sbjct: 1607 DPLFDWTMNPLKALYLQQRPEDETELHPTLN 1637


>AK001027-1|BAA91472.1|  397|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
           CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
          Length = 397

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -2

Query: 172 ARRHTHQTGA--ARRLLDGTARRADDQARTSG*DQVQP 65
           A+ H+ Q+ A  + + + GTA +ADD A T G  Q QP
Sbjct: 69  AQTHSEQSPADTSAQTVSGTATQADDAAPTDGQPQTQP 106


>AK074080-1|BAB84906.2|  302|Homo sapiens FLJ00151 protein protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 3   GIKAVHVHFSGCMGVNTWTDPGCTWSHP 86
           G++    HF GC G    T PG  W  P
Sbjct: 67  GVQGRWAHFWGCCGTADPTSPGGLWQRP 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,605,482
Number of Sequences: 237096
Number of extensions: 621931
Number of successful extensions: 6371
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6371
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)