Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5052
         (425 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M31162-1|AAA28859.1|  448|Drosophila melanogaster protein ( D.me...    30   1.5  
AY089622-1|AAL90360.1|  448|Drosophila melanogaster RE35772p pro...    30   1.5  
AY061501-1|AAL29049.1|  448|Drosophila melanogaster LD46049p pro...    30   1.5  
AE014134-1210|AAF52471.1|  448|Drosophila melanogaster CG8749-PA...    30   1.5  
AY069510-1|AAL39655.1|  470|Drosophila melanogaster LD22971p pro...    27   7.9  
AE014298-2112|AAF48431.2|  639|Drosophila melanogaster CG15029-P...    27   7.9  
AE014297-2006|AAF55167.2|  470|Drosophila melanogaster CG6276-PA...    27   7.9  

>M31162-1|AAA28859.1|  448|Drosophila melanogaster protein (
           D.melanogaster U1 70Ksmall nuclear ribonucleoprotein
           gene, complete cds. ).
          Length = 448

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -3

Query: 168 DDIHIKQEPLDD-YSMEQHEGLMIKQE--PPDETKYNP 64
           D I IK+EP+DD Y    ++   IK+E    DE KY P
Sbjct: 369 DVIKIKEEPVDDGYPTFDYQNATIKREIDDEDEEKYRP 406


>AY089622-1|AAL90360.1|  448|Drosophila melanogaster RE35772p
           protein.
          Length = 448

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -3

Query: 168 DDIHIKQEPLDD-YSMEQHEGLMIKQE--PPDETKYNP 64
           D I IK+EP+DD Y    ++   IK+E    DE KY P
Sbjct: 369 DVIKIKEEPVDDGYPTFDYQNATIKREIDDEDEEKYRP 406


>AY061501-1|AAL29049.1|  448|Drosophila melanogaster LD46049p
           protein.
          Length = 448

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -3

Query: 168 DDIHIKQEPLDD-YSMEQHEGLMIKQE--PPDETKYNP 64
           D I IK+EP+DD Y    ++   IK+E    DE KY P
Sbjct: 369 DVIKIKEEPVDDGYPTFDYQNATIKREIDDEDEEKYRP 406


>AE014134-1210|AAF52471.1|  448|Drosophila melanogaster CG8749-PA
           protein.
          Length = 448

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -3

Query: 168 DDIHIKQEPLDD-YSMEQHEGLMIKQE--PPDETKYNP 64
           D I IK+EP+DD Y    ++   IK+E    DE KY P
Sbjct: 369 DVIKIKEEPVDDGYPTFDYQNATIKREIDDEDEEKYRP 406


>AY069510-1|AAL39655.1|  470|Drosophila melanogaster LD22971p
           protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 150 QEPLDDYSMEQHEGLMIKQEPPDETKYNPDLS 55
           +EP+DDY  E HE    +Q+  D  K  P  S
Sbjct: 219 EEPVDDYEQEAHEPEEDEQDDQDLHKMAPTSS 250


>AE014298-2112|AAF48431.2|  639|Drosophila melanogaster CG15029-PA
           protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 141 LDDYSMEQHEGLMIKQEPPDETKYNPDLSMY*PPYTQ 31
           L D S++  E + I+ EP  E+ Y+  +S+  PP T+
Sbjct: 491 LPDESLKPEETVEIQNEPEAESNYDSLMSLPAPPSTE 527


>AE014297-2006|AAF55167.2|  470|Drosophila melanogaster CG6276-PA
           protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 150 QEPLDDYSMEQHEGLMIKQEPPDETKYNPDLS 55
           +EP+DDY  E HE    +Q+  D  K  P  S
Sbjct: 219 EEPVDDYEQEAHEPEEDEQDDQDLHKMAPTSS 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,337,735
Number of Sequences: 53049
Number of extensions: 192108
Number of successful extensions: 1055
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)