Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5050
(531 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 40 0.001
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 39 0.002
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 36 0.027
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 31 0.44
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060... 29 1.8
01_01_0753 - 5814087-5814344,5814461-5814646,5814847-5815004,581... 29 1.8
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 29 2.3
05_05_0239 - 23543592-23544293,23544482-23544634,23544737-235449... 28 5.4
03_02_0091 + 5574528-5577254 28 5.4
03_06_0674 - 35449373-35449465,35449959-35450112,35450763-354508... 27 7.1
01_06_1328 + 36347963-36347984,36348609-36348764,36349083-363492... 27 7.1
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211... 27 9.4
04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947... 27 9.4
03_05_0815 + 27917516-27917767,27918024-27918110,27918281-279183... 27 9.4
02_02_0709 - 13163580-13163725,13163774-13163861 27 9.4
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 27 9.4
02_01_0637 + 4774333-4775262,4775636-4775829,4775947-4776250 27 9.4
01_07_0107 - 41118897-41120036 27 9.4
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FD V ++L L G P+ WI + L V++ G +T G+ QG LS
Sbjct: 47 FDSVNWQSLFQILSVKGFPDNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQGDPLS 106
Query: 182 PTLFILYINDML 217
P LFIL + D+L
Sbjct: 107 PYLFIL-VADVL 117
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FD + H A+LS + G P +W+ S V+++G ++ GV QG LS
Sbjct: 462 FDTIEHSAILSVMQHMGFPLKWIEWVQMVFSTASSAVLLNGVPGNSFKCRRGVRQGVPLS 521
Query: 182 PTLFIL 199
LF+L
Sbjct: 522 LLLFVL 527
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FD V +L L G PE WI L V+++G + G+ QG LS
Sbjct: 1062 FDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPGRWICCKKGLLQGDPLS 1121
Query: 182 PTLFILYINDML 217
LFIL + D+L
Sbjct: 1122 SYLFIL-VADVL 1132
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
+DR+ L L G + + + + ++G+ +DT+ + G+ QG +S
Sbjct: 263 YDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRINGELTDTVVPSRGIRQGDPIS 322
Query: 182 PTLFIL 199
P LF+L
Sbjct: 323 PYLFLL 328
>08_02_0104 + 12404890-12405129,12405244-12405333,12405953-12406036,
12406888-12407132,12409032-12409095,12409270-12409968,
12410063-12410176,12410287-12410418,12410594-12410770,
12411085-12411138,12411230-12411292,12411396-12412307,
12412408-12412535,12413680-12413962
Length = 1094
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/79 (21%), Positives = 33/79 (41%)
Frame = +2
Query: 5 DRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSP 184
D +H + + G+ + L W A +G + +V D +CS T I+ V + P
Sbjct: 902 DLDYHTQIEYRWGGEGLRKTLICWAAEKSEGGQVVLVEDEECSSTYCISFRVKNAEAVPP 961
Query: 185 TLFILYINDMLSIDGMHCY 241
+ + + I + C+
Sbjct: 962 ---VKELRKTMRIQALRCH 977
>01_01_0753 -
5814087-5814344,5814461-5814646,5814847-5815004,
5815082-5815214,5815299-5815489,5815826-5816281,
5816543-5816661,5816729-5816872,5816994-5817065,
5817368-5817500,5817598-5817733
Length = 661
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 35 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 136
KLP + +C W A +L G+S + +VD +
Sbjct: 563 KLPEADDQKSMCNWAAEYLKGKSYSKLVDASLKE 596
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +2
Query: 8 RVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGD----CSDTMTINAGVPQGSV 175
R ++LL+ S+ +P WIA+ +D S +VVD D + I G+P G +
Sbjct: 161 RTCFKSLLNFQSSF-VPNQFASWIANHVDVSSSDIVVDDKVIPLTEDCVHIILGLPVGGI 219
Query: 176 LSPTLFILYINDMLSIDG 229
+ F L N +L G
Sbjct: 220 EISSNFELGKNKILETFG 237
>05_05_0239 -
23543592-23544293,23544482-23544634,23544737-23544922,
23544951-23545097,23545274-23545411,23545527-23545727
Length = 508
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 298 APRETLMADISRIPRAVIRIAMHAINRQHVIDIQDEERGGE 176
A T+ A +R R ++ H +N Q V+D+ DE+ G+
Sbjct: 291 ANENTVYARENRFLREIVEF--HQLNMQDVVDLDDEDMAGD 329
>03_02_0091 + 5574528-5577254
Length = 908
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 5 DRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVP 163
D + HR L LP G P+ + I L S +++DG ++ GVP
Sbjct: 226 DAMAHRLGLCALPDGGAPDHRARPIFEVLRDSSFLLLLDGVTKPVDLVDIGVP 278
>03_06_0674 -
35449373-35449465,35449959-35450112,35450763-35450860,
35450947-35451234,35451313-35451503,35451789-35452006,
35452314-35452653,35452726-35453167
Length = 607
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 433 GPLCHGAAIPRSIPA--TFREYWDTWGRHFE 519
G C+ + S P T++ WD WGR+ E
Sbjct: 234 GTDCYSCSFANSTPIHETYQPRWDYWGRYME 264
>01_06_1328 +
36347963-36347984,36348609-36348764,36349083-36349261,
36349347-36349442,36349525-36349594,36349635-36349705,
36350654-36351286
Length = 408
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -3
Query: 304 HHAPRE-TLMADISRIPRAVIRI-AMHAINRQHVIDIQDEERGGEHRTLWNARVNGH 140
H RE T+ + PRA A HA+N QHVI + G ++T+ + NGH
Sbjct: 296 HRGAREFTVGRQVHNPPRARQSTGAYHALNSQHVIPALSQP-AGIYQTVGPYQSNGH 351
>11_01_0285 -
2115051-2115146,2115220-2115306,2115417-2115503,
2115724-2115809,2115889-2115992,2117447-2117533,
2117621-2117744,2118420-2118538,2118626-2118755,
2118902-2118990,2119122-2119210,2119985-2120078,
2120187-2120266,2120363-2120452,2121195-2121281,
2121381-2121425,2121847-2121923,2121997-2122102,
2122258-2122339,2122430-2122501,2122502-2122585,
2123007-2123084,2123155-2123224,2123737-2123851
Length = 725
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 23 ALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILY 202
A+ S L +GIPEG C I + R ++VD C+ ++ VP L P + +
Sbjct: 155 AIGSGLIYHGIPEGAC--IGLYFINRPEWIIVDHACAAYSFVS--VPLYDTLGPDA-VQF 209
Query: 203 INDMLSIDGMHC 238
I + +++ + C
Sbjct: 210 IVNHATVEAIFC 221
>04_04_1465 +
33794225-33794389,33794471-33794597,33794669-33794799,
33795153-33795254,33795337-33795420,33795504-33795731,
33795934-33796038,33796376-33796731,33797146-33797303,
33797399-33797505,33797852-33798061
Length = 590
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -1
Query: 222 IDNMSLIYRMKSVGESTEPCGTPALMVMVSEQSPSTTTVMLRPSKKL 82
ID +SLI + G + A ++ +++P T VML+ S K+
Sbjct: 476 IDRVSLILTLGGTGFTPRDVTPEATKSVIEKEAPGLTYVMLQESLKI 522
>03_05_0815 + 27917516-27917767,27918024-27918110,27918281-27918394,
27919644-27919835,27919925-27921677,27921771-27922708,
27923587-27923859
Length = 1202
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 285 VSLGAWCKRDDQNLCL--KWRTLWGE 356
VS G WC R NLCL LWG+
Sbjct: 1078 VSFGVWCIRQILNLCLVESRPELWGK 1103
>02_02_0709 - 13163580-13163725,13163774-13163861
Length = 77
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2
Query: 317 IVSLAPRSERDSDGRYIAHP 258
IV++ PR + D++GRY A+P
Sbjct: 3 IVTVIPRPQADAEGRYEANP 22
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 68 CKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFIL 199
CK + L+ I + +G SD G+ QG LSP LF+L
Sbjct: 205 CKKLRYLLEETRIDI--NGTLSDPFKPMRGLRQGDPLSPLLFVL 246
>02_01_0637 + 4774333-4775262,4775636-4775829,4775947-4776250
Length = 475
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 213 CCLLMACIAMRMTARGMRDISAIRVSLGAW 302
C LL+A + +R+TA+ D A R+ G W
Sbjct: 14 CFLLLALMVVRLTAKRRGDNGAERLPPGPW 43
>01_07_0107 - 41118897-41120036
Length = 379
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -1
Query: 528 WTSLEMSTPSIPILSEGC-----RDTPWNCGAMTKG 436
W++ + ++P S+ C +D PWNC + T G
Sbjct: 19 WSTCLAAHSTVPCRSDVCAAAAVQDNPWNCSSSTDG 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,096,406
Number of Sequences: 37544
Number of extensions: 389059
Number of successful extensions: 1209
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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