Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5049
(326 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 120 3e-28
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 118 1e-27
08_02_0657 - 19749835-19751942,19753123-19753561 87 4e-18
06_01_0057 - 483710-484309 29 0.86
01_06_1778 - 39820552-39821991 29 1.1
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446... 28 2.0
02_05_0876 - 32399066-32399920 27 3.5
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 27 3.5
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 27 3.5
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 27 4.6
06_03_0607 - 22703662-22703786,22704402-22704618 26 6.1
05_05_0262 - 23666184-23666262,23666564-23667759 26 6.1
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 26 6.1
01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952... 26 6.1
12_02_0967 - 24916352-24916402,24916662-24916717,24917602-249176... 26 8.0
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 26 8.0
01_03_0182 + 13537522-13539699 26 8.0
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 120 bits (289), Expect = 3e-28
Identities = 58/88 (65%), Positives = 68/88 (77%)
Frame = +3
Query: 57 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 236
AD K D STAIL RK PNRL+V+EA +DDNSVVAL ME+LQLFRGDTVLLKGK+
Sbjct: 11 ADPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKK 70
Query: 237 RKGTVCIVLSDDNCPDEKIRMNRGGRNN 320
RK T+CIVL+D+ C + KIRMN+ R N
Sbjct: 71 RKDTICIVLADETCEEPKIRMNKVVRKN 98
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 118 bits (284), Expect = 1e-27
Identities = 55/88 (62%), Positives = 67/88 (76%)
Frame = +3
Query: 57 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 236
+D K D STAIL RK PNRL+V+EA +DDNSV+ + ME+LQLFRGDTVLLKGK+
Sbjct: 11 SDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKK 70
Query: 237 RKGTVCIVLSDDNCPDEKIRMNRGGRNN 320
RK T+CIVL+DD C + KIRMN+ R N
Sbjct: 71 RKDTICIVLADDTCEEPKIRMNKVVRKN 98
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 86.6 bits (205), Expect = 4e-18
Identities = 43/86 (50%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 DLSTAILR--RKDRPNRLIVEEA---VSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRK 242
D STAIL +K PNRL+ ++A V+ DNS V LS+A ME+L +FRGD V L+G+RR+
Sbjct: 16 DYSTAILECAKKKSPNRLMADDAEGGVAVDNSTVTLSEATMEELGIFRGDLVTLRGRRRR 75
Query: 243 GTVCIVLSDDNCPDEKIRMNRGGRNN 320
VC D++CPD ++R++RG R+N
Sbjct: 76 EAVCYAQKDESCPDGRLRLSRGVRSN 101
>06_01_0057 - 483710-484309
Length = 199
Score = 29.1 bits (62), Expect = 0.86
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 82 YRPRSSVARTDPTVSLSKKQSAMTTQS-WHFHRPKWSNFNSSVVTQSCSR 228
Y P ART P ++ + A S W F WS+ S V+T+ SR
Sbjct: 62 YFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSR 111
>01_06_1778 - 39820552-39821991
Length = 479
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +3
Query: 90 AILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKGTVCIVLSD 269
A LR+K RP L +AV D +SQ +++QL T+L KRR+ + +D
Sbjct: 99 ARLRQKGRPGELDPPDAVLD-----GMSQDELQQLLASIDATLLATAKRREALGLLPGAD 153
Query: 270 DN 275
D+
Sbjct: 154 DD 155
>11_04_0301 +
16142236-16142945,16143748-16144247,16144557-16144649,
16144879-16145005,16145265-16145468,16145587-16145692
Length = 579
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +1
Query: 193 FNSSVVTQSCSRANAAREPFA----SCSQTIIALMRKF 294
+NSS + SC+ A ++PF SC+ ++ L R+F
Sbjct: 475 YNSSRLLYSCTAREAEQQPFGCLTDSCTDSLTVLKRRF 512
>02_05_0876 - 32399066-32399920
Length = 284
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 118 TVSLSKKQSAMTTQSWHFHRPKWSNFNSSVVTQSCSRANAAREPFASCSQTIIAL 282
+VSL+K S + T+ F KW S + R + A+E +A I AL
Sbjct: 228 SVSLAKGLSLLGTEEARFIEGKWRRQLDSEIQTQMRRHDLAKEVYALLMDAIKAL 282
>02_03_0273 +
17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 48 NKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAK 182
+ MA + P +L AI DRP +EEA D +S+V ++++
Sbjct: 766 SSMALCRPPVELVQAISTVSDRPTISALEEAGDDGHSIVDAAESR 810
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 132 EEAVSDDNSVVALSQAKMEQL-QLFRGDTVLLKGKRRKGTVCIVLSDDNCPDEKIRMN 302
EE +NS + + AK++ L Q GD++ + KRR +V L+ + D +N
Sbjct: 449 EEEFRRENSDIEMKDAKVDLLDQTLSGDSLRAR-KRRGASVLYALTSEELKDHLCTLN 505
>10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 163 WHFHRPKWSNFNSSVVTQSCSRANAAREPFASCSQTIIALM 285
W HR + +++++ QSC R AR F+ + AL+
Sbjct: 905 WRLHRTYQQSHSAALLIQSCIRGFIARHYFSVIKEQKAALV 945
>06_03_0607 - 22703662-22703786,22704402-22704618
Length = 113
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 261 ARCKRFPCGVCP*ARLCHHGRVEVAPFWPVKVPRLS 154
A FP + P R H RV++A F P +VP ++
Sbjct: 26 AHLSAFPSRLAP-PRCVPHDRVQLAAFRPTRVPAVA 60
>05_05_0262 - 23666184-23666262,23666564-23667759
Length = 424
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -3
Query: 267 LRARCKRFPCGVCP*--ARLCHHGRVEVAP 184
LR KR PC V AR+CH+ RV VAP
Sbjct: 13 LRLVHKRLPCLVDRRRMARVCHNWRVAVAP 42
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 267 DDNCPDEKIRMNRGGRNN 320
DD P+ + R NRGG NN
Sbjct: 130 DDGNPNPRSRRNRGGENN 147
>01_06_0919 - 32993752-32993856,32994383-32994592,32994666-32995220,
32995705-32995926,32996381-32996511,32997456-32998353,
32998453-32998530,32998612-32998683,32998728-32998763,
32999413-33000353,33000531-33000659,33000751-33000894,
33000994-33001060,33002434-33002502,33003144-33003278
Length = 1263
Score = 26.2 bits (55), Expect = 6.1
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 117 NRLIVEEAVSDDNSV-VALSQAKMEQLQLFRGDTVLLKGKRRKGTVCIVLSDDNCPD 284
N+ I+E+ DD+ V+ + ++ LF T+ R + C LSDD+C D
Sbjct: 991 NQCILEQLTGDDSVCPVSNCRVRLNSTSLFSRGTLECALSR---STCEFLSDDSCED 1044
>12_02_0967 -
24916352-24916402,24916662-24916717,24917602-24917685,
24917751-24918251,24918520-24919207
Length = 459
Score = 25.8 bits (54), Expect = 8.0
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 144 SDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKGTVCIVLSDDNCPDEKIR-----MNRG 308
SDD+ V + K QL + ++ G +C++ S N PDEK+ + G
Sbjct: 360 SDDDRVKTTKERKEMSRQL---SSYIIYLVFNCGVMCLLASQGNNPDEKVAVVTKLLLEG 416
Query: 309 GRNN 320
G NN
Sbjct: 417 GNNN 420
>05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 103 ARTDPTVSLSKKQSAMTTQSWHFHRPKWSNFNSSVVTQSCSRANAAREPF 252
A + +V SK Q+ + WH + W N S T+ + + +PF
Sbjct: 1340 AEVESSVLCSKWQNEIKDPEWHPFKSVWVNGKESCRTEFQTLQSTQDDPF 1389
>01_03_0182 + 13537522-13539699
Length = 725
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 163 WHFHRPKWSNFNSSVVTQSCSRANAAREPFASCSQTIIALMR 288
W +RP+WSN S+ +C P SC+ I+ +R
Sbjct: 428 WPENRPRWSN---SMGQYNCVNRLVGISPPTSCTPKIMTYLR 466
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,786,641
Number of Sequences: 37544
Number of extensions: 159761
Number of successful extensions: 445
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 435246480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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