Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5047
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034031-1|AAH34031.1|  327|Homo sapiens SLC16A10 protein protein.     31   4.0  
U19247-1|AAC52064.1|  484|Homo sapiens interferon-gamma receptor...    30   9.1  

>BC034031-1|AAH34031.1|  327|Homo sapiens SLC16A10 protein protein.
          Length = 327

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
 Frame = +3

Query: 282 HYCFTAEIGRVLVPIRAGLQ--EVLLPVIMQIIINYVWIVRITVAVLCFIFMCLFIWETA 455
           HY F   +G V   + AG     +LLP++++++I+ V +   T+ VLC     LF+    
Sbjct: 193 HY-FKKRLGLVNGIVTAGSSVFTILLPLLLRVLIDSVGLF-YTLRVLCIFMFVLFLAGFT 250

Query: 456 QNKQYVTNRQTNKLHMVSAVNIRYDCRKNKETFHMIHLLGLKLYNLKITNFT 611
                 + +        S++  R      K+ F   HL G  L ++   N T
Sbjct: 251 YRPLATSTKDKESGGSGSSLFSRKKFSPPKKNFQFCHLQGDSLCSVGSWNTT 302


>U19247-1|AAC52064.1|  484|Homo sapiens interferon-gamma receptor
           alpha chain protein.
          Length = 484

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 16/73 (21%), Positives = 28/73 (38%)
 Frame = +3

Query: 225 DISSKVSIYNSCPASQTEMHYCFTAEIGRVLVPIRAGLQEVLLPVIMQIIINYVWIVRIT 404
           D   ++    + P S     YC    +  V        +EV + +    I   +WI  + 
Sbjct: 193 DDCDEIQCQLAIPVSSLNSQYCSAEGVLHVWGVTTEKSKEVCITIFNSSIKGSLWIPVVA 252

Query: 405 VAVLCFIFMCLFI 443
             VL  +F+C +I
Sbjct: 253 ALVLSLVFICFYI 265


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,200,260
Number of Sequences: 237096
Number of extensions: 2298096
Number of successful extensions: 3753
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3751
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)