Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5037
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13646-2|AAP68930.1|  295|Caenorhabditis elegans Hypothetical pr...    80   2e-15
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    31   0.76 
Z78417-9|CAI70407.1|  700|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z54216-4|CAA90947.1|  421|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical...    28   7.0  
AF068713-1|AAC17794.1|  206|Caenorhabditis elegans Hypothetical ...    28   7.0  
Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z68116-10|CAI79231.1|  182|Caenorhabditis elegans Hypothetical p...    27   9.3  

>U13646-2|AAP68930.1|  295|Caenorhabditis elegans Hypothetical
           protein ZK783.2 protein.
          Length = 295

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
 Frame = +2

Query: 320 DGTVRLRNPNIELMDQ-DILYHLALGSGSHDLVEMFGDVKFVCMGGTPKRMEQFAYTIMA 496
           +G V   N   ++ D+ D LYH   G  + D+  +FGD KFVC GG+P R + +A     
Sbjct: 7   NGNVEKPNKYFDIKDKRDFLYHFGFGVDTLDIPAVFGDTKFVCTGGSPGRFKLYAEWFAK 66

Query: 497 EIGHKLPCGTTLQDISHFSYRYSMYKVGPVLSISHGMGIPSVGILLHEVIKV 652
           E    +PC   L      S R+ +YK GPV  I+HGMG PS+ I+L E  K+
Sbjct: 67  EA--NIPCSENLSR----SDRFVIYKTGPVCWINHGMGTPSLSIMLVESFKL 112


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 143 DYLVAVITKMNGHTNGI-NAVQSQATCSRNPHRRTFDNDDEFQEADGTPVGAD 298
           +++V+    +NG+T G+    Q  A C  +P   T      F+  DG+  G+D
Sbjct: 100 EFIVSSYVSLNGNTVGVWLGAQRTAACWSSPLTATCSKTTSFEWTDGSATGSD 152


>Z78417-9|CAI70407.1|  700|Caenorhabditis elegans Hypothetical
           protein C35C5.11 protein.
          Length = 700

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
 Frame = -1

Query: 610 AHTVTYRKYRANFIHGVSVRKMTDVLQ--CSSTRQLVPYLRHDCVCELFHAFRCSAHAHK 437
           A TV      +N++H +S+   T  +Q   S    +   +  D +    H+    AH   
Sbjct: 15  AATVVVTVLISNYVHQLSMSSGTPTIQNTVSIANNIRQLINTDKIRSNLHSLTKKAHVAG 74

Query: 436 LDVSKHLNKIMGAAPKGQMVENILVHEFNVRVTQSDSAIWVSNGIV 299
            + +  + +I+      Q +EN+  +E+NV ++  D   W +  IV
Sbjct: 75  TENNLRVAEIIRDQMISQGLENVHFNEYNVLLSYPD---WTTPNIV 117


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
 Frame = -1

Query: 652  NLYDFVKQDSDRRYAHTVTYRKYRANFIHGVSVRKMTDVLQCSSTRQLVPYLRHDCVCEL 473
            N++D   ++  R  +     ++   N +HG     +   +     R ++ YL+ D +   
Sbjct: 2524 NIFDGFGENMIRTTSQVDEMKQMFRNHLHGKYSPLVQSHMYAPRQRIMMAYLKGDFMTIY 2583

Query: 472  FHAFRCSAHAHKLDVSKHLNKIMG-AAPKGQMVENILVHEFNV 347
            F+ +  S H   +D +   NKI+G    K +++  I +H+  +
Sbjct: 2584 FYNYHYSIHKEAVDCT---NKIVGFHNAKSRLLREIGLHKMGI 2623


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
 Frame = -1

Query: 652  NLYDFVKQDSDRRYAHTVTYRKYRANFIHGVSVRKMTDVLQCSSTRQLVPYLRHDCVCEL 473
            N++D   ++  R  +     ++   N +HG     +   +     R ++ YL+ D +   
Sbjct: 2524 NIFDGFGENMIRTTSQVDEMKQMFRNHLHGKYSPLVQSHMYAPRQRIMMAYLKGDFMTIY 2583

Query: 472  FHAFRCSAHAHKLDVSKHLNKIMG-AAPKGQMVENILVHEFNV 347
            F+ +  S H   +D +   NKI+G    K +++  I +H+  +
Sbjct: 2584 FYNYHYSIHKEAVDCT---NKIVGFHNAKSRLLREIGLHKMGI 2623


>Z54216-4|CAA90947.1|  421|Caenorhabditis elegans Hypothetical
           protein T24H10.5 protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/61 (24%), Positives = 30/61 (49%)
 Frame = -1

Query: 430 VSKHLNKIMGAAPKGQMVENILVHEFNVRVTQSDSAIWVSNGIVVGSYRSSVGFLKFVVV 251
           ++KH+  ++G    G    NI++ E  V V    + + +  G+   +  SS  F+K + V
Sbjct: 77  INKHIKTLIGEE-SGVETNNIIIGEQRVSVAVQSAEVLLKVGVNFENEASSEAFVKIIQV 135

Query: 250 I 248
           +
Sbjct: 136 V 136


>Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical
           protein T16G1.1 protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 212 ATCSRNPHRRT-FDNDDEFQEADGTPVGADDNSVRY 316
           +T   NP+R++ +D DD++++ DG   G + N   Y
Sbjct: 330 STSMPNPNRKSKYDEDDDYEDGDGN--GCNGNGCSY 363


>AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical
           protein Y53F4B.25 protein.
          Length = 603

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = -2

Query: 456 VPPMHTNLTSPNISTRSWEPLPR 388
           +PP+H + ++PN  T+ ++P+P+
Sbjct: 234 IPPLHPHQSTPNPLTQFFQPIPQ 256


>AF068713-1|AAC17794.1|  206|Caenorhabditis elegans Hypothetical
           protein T24A6.7 protein.
          Length = 206

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 520 TRQLVPYLRHDCVCELFHAFRCSAHAHKLDVSKHLN 413
           T+Q V + + DCV   F+    SA   + DV K++N
Sbjct: 12  TKQFVFFYKFDCVFSNFYPCEFSAQEFENDVEKNVN 47


>Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical
           protein T03D8.3 protein.
          Length = 211

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 487 CVCELFHAFRCSAHAHKLDVSKHLNKIM 404
           C+C+  H F C A     DVS+ L KI+
Sbjct: 126 CICDQEHMFNC-AEKEAQDVSESLQKIL 152


>Z68116-10|CAI79231.1|  182|Caenorhabditis elegans Hypothetical
           protein F42F12.11 protein.
          Length = 182

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
 Frame = +2

Query: 260 EFQEADGTPVGADDNSVRYPDGTVRLRNPNIELMDQDILYHLALGSGSHDLVEMFGD-VK 436
           ++Q AD T     D  +   +  +   NP   L ++DI  ++ L  G +++ + +G+ V 
Sbjct: 38  KYQNADRTDSVNSDCKLEQTNRQLAFENPVYNLENEDIQPNIRLYDGHYEVSDGYGNQVD 97

Query: 437 FVCMGGTPKRMEQFAYTIMAEIGHKL 514
            V        + +  + +  +I H L
Sbjct: 98  LVLTVAQRNLISERCFLLQGKIAHVL 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,208,372
Number of Sequences: 27780
Number of extensions: 396242
Number of successful extensions: 1012
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)