Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5029
         (532 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084174-1|AAL89912.1|  249|Drosophila melanogaster RE42193p pro...    29   5.2  
AE014297-243|AAF52034.1|  249|Drosophila melanogaster CG1172-PA ...    29   5.2  
BT015247-1|AAT94476.1| 1037|Drosophila melanogaster LP19917p pro...    28   9.1  
AE014134-482|AAF51201.1| 1475|Drosophila melanogaster CG3131-PA ...    28   9.1  

>AY084174-1|AAL89912.1|  249|Drosophila melanogaster RE42193p
           protein.
          Length = 249

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 527 NRPLCHEFSQWRRKNELLYKEMKLL*DKF 441
           NRPLCHE  +WR    L   +++   D+F
Sbjct: 38  NRPLCHETIRWRSDVPLTEGQLRSKRDEF 66


>AE014297-243|AAF52034.1|  249|Drosophila melanogaster CG1172-PA
           protein.
          Length = 249

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 527 NRPLCHEFSQWRRKNELLYKEMKLL*DKF 441
           NRPLCHE  +WR    L   +++   D+F
Sbjct: 38  NRPLCHETIRWRSDVPLTEGQLRSKRDEF 66


>BT015247-1|AAT94476.1| 1037|Drosophila melanogaster LP19917p
           protein.
          Length = 1037

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -2

Query: 195 SYITAELNKKNNTFFILIKYIFQNYSITNKL*HYAFITFITEISH 61
           +YIT     + N F++ + Y+        +  HY+F+   T++ H
Sbjct: 518 AYITFLEENRQNIFYLFLFYVVTIVLFVERFIHYSFMAEHTDLRH 562


>AE014134-482|AAF51201.1| 1475|Drosophila melanogaster CG3131-PA
            protein.
          Length = 1475

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -2

Query: 195  SYITAELNKKNNTFFILIKYIFQNYSITNKL*HYAFITFITEISH 61
            +YIT     + N F++ + Y+        +  HY+F+   T++ H
Sbjct: 956  AYITFLEENRQNIFYLFLFYVVTIVLFVERFIHYSFMAEHTDLRH 1000


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,924,879
Number of Sequences: 53049
Number of extensions: 336150
Number of successful extensions: 574
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)